Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 AC104695.2-201ENST00000605056 775 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 AL035661.1-201ENST00000620459 1144 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 AC022919.1-201ENST00000624979 626 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 CR383656.5-201ENST00000547616 1340 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 AC096921.2-201ENST00000561507 1916 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 RPS2P45-201ENST00000469997 2057 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 CDY5P-201ENST00000411487 1580 ntBASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 CDY9P-201ENST00000451397 1580 ntBASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 AL133243.4-201ENST00000623116 3109 ntBASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 RPS7P3-201ENST00000443360 580 ntBASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 AC103563.5-201ENST00000455643 364 ntBASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 AC024589.2-201ENST00000605642 1294 ntBASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 AC235565.1-201ENST00000456962 1325 ntBASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 SALL4P7-201ENST00000555779 3120 ntBASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHANK2Q9UPX8 AL136531.3-201ENST00000624378 3658 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 SELENOWP1-201ENST00000322792 252 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 RN7SKP77-201ENST00000363261 353 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 RNA5SP333-201ENST00000363466 118 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 RNA5SP334-201ENST00000364825 118 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 RNU6-171P-201ENST00000384354 107 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 OTX2P1-201ENST00000450956 354 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 RN7SL727P-201ENST00000482164 296 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 GNG2-208ENST00000554875 430 ntTSL 5 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 AL391261.1-201ENST00000555712 1479 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 AL157831.2-201ENST00000564681 3095 ntBASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SHANK2Q9UPX8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 AC006455.6-201ENST00000426192 893 ntBASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 AL157777.1-201ENST00000468100 304 ntBASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 MIR7155-201ENST00000615925 56 ntBASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 AC119674.1-217ENST00000641942 1086 ntBASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 AC016583.1-201ENST00000624221 2431 ntBASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 LINC01963-201ENST00000562038 3148 ntBASIC9.03□□□□□ -0.96
SHANK2Q9UPX8 RN7SKP115-201ENST00000363177 317 ntBASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.02□□□□□ -0.96
SHANK2Q9UPX8 PTCD2P2-201ENST00000415579 1095 ntBASIC9.02□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms