Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 WDR95P-201ENST00000425638 1542 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 OR9K1P-201ENST00000326513 941 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 RNA5SP333-201ENST00000363466 118 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 RNA5SP334-201ENST00000364825 118 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 MIR143-201ENST00000385300 106 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AL355433.1-201ENST00000422804 300 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC099677.3-201ENST00000427081 395 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC011225.1-201ENST00000457751 369 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AL022319.1-201ENST00000458183 1167 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC023245.1-201ENST00000468501 517 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 RN7SL799P-201ENST00000475891 298 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC138866.2-201ENST00000508650 584 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 CYCSP22-201ENST00000517555 339 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 IGLV3-30-201ENST00000524362 298 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC011497.2-201ENST00000600255 639 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC092725.2-201ENST00000567658 1389 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 CR788268.1-201ENST00000603931 1809 ntBASIC7.72□□□□□ -1.17
SCN11AQ9UI33 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 RNA5SP132-201ENST00000364725 118 ntBASIC7.72□□□□□ -1.17
SCN11AQ9UI33 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AC113412.1-201ENST00000425840 504 ntBASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 RPS27AP2-201ENST00000457576 465 ntBASIC7.72□□□□□ -1.17
SCN11AQ9UI33 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 OR56A7P-201ENST00000524865 941 ntBASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCN11AQ9UI33 RNA5SP394-201ENST00000364216 119 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 RNA5SP211-201ENST00000365516 117 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 RN7SKP29-201ENST00000410957 272 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 AL596448.1-201ENST00000415024 392 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 TMEM97P2-201ENST00000517841 403 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 AC007225.2-201ENST00000562529 256 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 AC145423.1-201ENST00000605712 336 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 CU639417.4-201ENST00000623928 207 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 LINC01963-201ENST00000562038 3148 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 MAPK10-261ENST00000641050 3109 ntBASIC7.71□□□□□ -1.17
SCN11AQ9UI33 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.71□□□□□ -1.17
SCN11AQ9UI33 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 LINC01616-201ENST00000561816 2280 ntBASIC7.71□□□□□ -1.18
SCN11AQ9UI33 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 RNU6-171P-201ENST00000384354 107 ntBASIC7.71□□□□□ -1.18
SCN11AQ9UI33 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 GTF3AP1-201ENST00000416942 1004 ntBASIC7.71□□□□□ -1.18
SCN11AQ9UI33 AL513325.1-201ENST00000417716 1034 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms