Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC005077.1-201ENST00000449226 375 ntBASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 RNA5SP340-201ENST00000517132 107 ntBASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 IGKV3D-34-201ENST00000522638 302 ntBASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 OR7E158P-201ENST00000524483 910 ntBASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 AC110056.1-201ENST00000525759 911 ntBASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NPC1L1Q9UHC9 RNU1-150P-201ENST00000362491 162 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 RNA5SP211-201ENST00000365516 117 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 RPS29P14-201ENST00000431518 171 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 DNAJA1P5-201ENST00000440278 943 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 PPIAP20-201ENST00000449839 135 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 SDC4P-201ENST00000453285 601 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC023245.1-201ENST00000468501 517 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC025458.1-201ENST00000506046 166 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 MED21-206ENST00000546323 575 ntTSL 3 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC007956.1-201ENST00000555623 542 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC108673.3-201ENST00000609183 335 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 CASC19-238ENST00000641523 1558 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 SNORA77.2-201ENST00000408571 112 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC110602.1-201ENST00000437414 318 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 RAB28P2-201ENST00000454299 641 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 RN7SL269P-201ENST00000467795 305 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
NPC1L1Q9UHC9 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
NPC1L1Q9UHC9 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
NPC1L1Q9UHC9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC8.21□□□□□ -1.09
NPC1L1Q9UHC9 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
NPC1L1Q9UHC9 AC012254.3-201ENST00000591183 2117 ntBASIC8.21□□□□□ -1.09
NPC1L1Q9UHC9 WBP11P1-201ENST00000562560 1931 ntBASIC8.21□□□□□ -1.09
NPC1L1Q9UHC9 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 NMD3P2-201ENST00000421815 761 ntBASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 AL162739.1-201ENST00000450606 307 ntBASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 AL359839.1-201ENST00000451975 1160 ntBASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 CST12P-201ENST00000457644 362 ntBASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 AC023194.2-201ENST00000465398 406 ntBASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms