Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 RBMY1HP-201ENST00000382759 1389 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 RNA5SP183-201ENST00000362452 119 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AL590139.1-201ENST00000416267 400 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AL049745.1-201ENST00000433953 286 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 ZNF619P1-201ENST00000446539 752 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 RANP1-206ENST00000455094 651 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 RPL35AP19-201ENST00000469425 329 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 GLRXP3-201ENST00000470810 321 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 THAP12P6-201ENST00000431978 2310 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 RPL35AP31-201ENST00000418340 337 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AC073072.2-201ENST00000447425 348 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AC022832.1-201ENST00000530718 645 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AC005244.1-201ENST00000582566 339 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 SUGT1P3-202ENST00000604259 383 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 HIRAP1-201ENST00000605318 787 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 MIR6758-201ENST00000620653 63 ntBASIC5.74□□□□□ -1.49
CHD8Q9HCK8 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 CASC19-248ENST00000641674 1356 ntBASIC5.73□□□□□ -1.49
CHD8Q9HCK8 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 RN7SKP62-201ENST00000384539 329 ntBASIC5.73□□□□□ -1.49
CHD8Q9HCK8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 P2RY10P2-201ENST00000416730 913 ntBASIC5.73□□□□□ -1.49
CHD8Q9HCK8 RN7SL459P-201ENST00000481078 302 ntBASIC5.73□□□□□ -1.49
CHD8Q9HCK8 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 AC087575.1-201ENST00000585087 229 ntBASIC5.73□□□□□ -1.49
CHD8Q9HCK8 AL049840.5-201ENST00000602827 552 ntBASIC5.73□□□□□ -1.49
CHD8Q9HCK8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 FO393409.1-201ENST00000399325 1372 ntBASIC5.73□□□□□ -1.49
CHD8Q9HCK8 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 AC245452.2-201ENST00000435222 392 ntBASIC5.73□□□□□ -1.49
CHD8Q9HCK8 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CHD8Q9HCK8 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD8Q9HCK8 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms