Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 OR7A1P-201ENST00000601206 970 ntBASIC9.23□□□□□ -0.93
SCAPERQ9BY12 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SCAPERQ9BY12 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 SNORA70-201ENST00000384436 135 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 HOTTIP_3.1-201ENST00000619957 337 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AC110373.1-201ENST00000505994 3505 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AP002364.1-201ENST00000623330 3386 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AL139415.1-201ENST00000424862 352 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AC023245.1-201ENST00000468501 517 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AC084337.1-201ENST00000524809 686 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 AL021918.2-201ENST00000613415 194 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 CU639417.4-201ENST00000623928 207 ntBASIC9.22□□□□□ -0.93
SCAPERQ9BY12 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SCAPERQ9BY12 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC9.21□□□□□ -0.93
SCAPERQ9BY12 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SCAPERQ9BY12 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 AC241584.2-201ENST00000637142 2090 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 CAST-202ENST00000325674 3356 ntTSL 5 BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 RNA5SP514-201ENST00000363717 111 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 AL050335.1-201ENST00000396909 869 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 RN7SKP216-201ENST00000411050 312 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 AL662874.1-201ENST00000426065 230 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 CFL1P1-202ENST00000432948 411 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 NPM1P27-201ENST00000502784 830 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 OR5M14P-201ENST00000506803 618 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 HMGN2P36-201ENST00000529541 409 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 AL049840.6-201ENST00000604583 345 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 RN7SL544P-201ENST00000617232 284 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 RN7SL763P-201ENST00000620922 284 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 AL137067.2-201ENST00000621202 131 ntBASIC9.21□□□□□ -0.94
SCAPERQ9BY12 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
SCAPERQ9BY12 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AL391262.1-201ENST00000556558 1992 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 PDZK1P1-202ENST00000425209 1350 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AC009120.2-204ENST00000621548 2032 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 ING3-204ENST00000431467 1447 ntTSL 2 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 RN7SKP77-201ENST00000363261 353 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 RN7SKP124-201ENST00000364730 341 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms