Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 Y_RNA.67-201ENST00000362870 100 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RNA5SP429-201ENST00000363688 109 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RNU6-374P-201ENST00000364146 108 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RN7SKP239-201ENST00000364814 295 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 Y_RNA.302-201ENST00000364997 102 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 SNORD81.2-201ENST00000365153 76 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 Y_RNA.422-201ENST00000384054 114 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 Y_RNA.459-201ENST00000384251 102 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RNU6-331P-201ENST00000384724 107 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 MIR595-201ENST00000384905 96 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 SNORA57.2-201ENST00000391265 128 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 OR7E101P-201ENST00000400428 513 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RPS27AP11-201ENST00000402798 447 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL356432.1-201ENST00000405809 419 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 SNORA11D-201ENST00000408548 128 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 SNORA11E-201ENST00000408778 128 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RNU4-61P-201ENST00000411243 107 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 PIGPP2-201ENST00000411569 458 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RSU1P3-201ENST00000412878 835 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL773545.3-201ENST00000414297 706 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC012354.2-201ENST00000423051 461 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL604028.2-201ENST00000437848 788 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 ARPC3P5-201ENST00000448802 534 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL109809.3-201ENST00000456875 246 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC063955.1-201ENST00000462872 685 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 RPL30P9-201ENST00000465586 330 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC009153.1-201ENST00000485799 496 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC104108.1-201ENST00000509930 412 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RNU6-1046P-201ENST00000516538 107 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 NXPE2P1-201ENST00000543705 726 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 CHEK2P2-201ENST00000554701 672 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL355375.2-201ENST00000574825 175 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL589765.5-201ENST00000596133 515 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL691432.1-202ENST00000597891 502 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC105429.2-201ENST00000610567 517 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AL078596.1-201ENST00000624856 447 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC091132.4-201ENST00000587960 2262 ntBASIC8.84□□□□□ -0.99
LRCH3Q96II8 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
LRCH3Q96II8 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC8.84□□□□□ -1
LRCH3Q96II8 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC8.84□□□□□ -1
LRCH3Q96II8 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.83□□□□□ -1
LRCH3Q96II8 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC8.83□□□□□ -1
LRCH3Q96II8 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC8.83□□□□□ -1
LRCH3Q96II8 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.83□□□□□ -1
LRCH3Q96II8 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 NVL-202ENST00000340871 2431 ntTSL 2 BASIC8.83□□□□□ -1
LRCH3Q96II8 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LRCH3Q96II8 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC8.83□□□□□ -1
LRCH3Q96II8 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC8.83□□□□□ -1
LRCH3Q96II8 SOCS5P4-201ENST00000454743 1566 ntBASIC8.83□□□□□ -1
LRCH3Q96II8 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 AC135352.1-201ENST00000506173 1418 ntBASIC8.83□□□□□ -1
LRCH3Q96II8 AOAH-211ENST00000617537 2381 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 AL008638.6-201ENST00000623947 4254 ntBASIC8.83□□□□□ -1
LRCH3Q96II8 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
LRCH3Q96II8 Y_RNA.86-201ENST00000363020 111 ntBASIC8.83□□□□□ -1
LRCH3Q96II8 RNU6-697P-201ENST00000363348 107 ntBASIC8.83□□□□□ -1
LRCH3Q96II8 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.83□□□□□ -1
LRCH3Q96II8 RNU6-549P-201ENST00000384433 107 ntBASIC8.83□□□□□ -1
LRCH3Q96II8 RNU6-878P-201ENST00000384578 110 ntBASIC8.83□□□□□ -1
LRCH3Q96II8 RAB28P1-201ENST00000411517 641 ntBASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms