Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
TOPBP1Q92547 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TOPBP1Q92547 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC10□□□□□ -0.81
TOPBP1Q92547 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC10□□□□□ -0.81
TOPBP1Q92547 OR2W4P-201ENST00000406496 926 ntBASIC10□□□□□ -0.81
TOPBP1Q92547 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC10□□□□□ -0.81
TOPBP1Q92547 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC10□□□□□ -0.81
TOPBP1Q92547 RPS4XP5-201ENST00000419038 768 ntBASIC10□□□□□ -0.81
TOPBP1Q92547 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC10□□□□□ -0.81
TOPBP1Q92547 PSMD10P3-201ENST00000437000 448 ntBASIC10□□□□□ -0.81
TOPBP1Q92547 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC10□□□□□ -0.81
TOPBP1Q92547 AC005297.1-201ENST00000444765 862 ntBASIC10□□□□□ -0.81
TOPBP1Q92547 AC083795.1-201ENST00000491760 320 ntBASIC10□□□□□ -0.81
TOPBP1Q92547 AC021146.10-201ENST00000515628 706 ntBASIC10□□□□□ -0.81
TOPBP1Q92547 CDC42P3-201ENST00000518493 633 ntBASIC10□□□□□ -0.81
TOPBP1Q92547 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC10□□□□□ -0.81
TOPBP1Q92547 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC10□□□□□ -0.81
TOPBP1Q92547 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC10□□□□□ -0.81
TOPBP1Q92547 AL023806.3-201ENST00000638502 2704 ntBASIC10□□□□□ -0.81
TOPBP1Q92547 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
TOPBP1Q92547 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
TOPBP1Q92547 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC10□□□□□ -0.81
TOPBP1Q92547 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TOPBP1Q92547 AC010478.1-201ENST00000601500 6762 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 RNA5SP211-201ENST00000365516 117 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 EIF4A1P7-201ENST00000421800 1220 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 ELOCP3-201ENST00000439303 348 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 RPS26P41-201ENST00000450370 284 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 BX284632.1-201ENST00000478218 541 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 EIF1P7-201ENST00000487533 337 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 AC009120.1-201ENST00000493458 473 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 HIGD1AP5-201ENST00000529959 259 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 AC073342.3-201ENST00000624211 193 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOPBP1Q92547 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOPBP1Q92547 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TOPBP1Q92547 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOPBP1Q92547 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC9.99□□□□□ -0.81
TOPBP1Q92547 SALL4P7-201ENST00000555779 3120 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 MRE11P1-201ENST00000464884 2127 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TOPBP1Q92547 AC114786.1-201ENST00000512892 1415 ntBASIC9.99□□□□□ -0.81
TOPBP1Q92547 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TOPBP1Q92547 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AL139805.2-201ENST00000455305 2433 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AL109941.1-201ENST00000401925 229 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 OR5W1P-201ENST00000423705 938 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AL450996.1-201ENST00000445574 1202 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 FAR2P1-206ENST00000449736 709 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 AURKAPS1-201ENST00000451805 1212 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 RPS4XP1-201ENST00000482189 787 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 MIR6820-201ENST00000611508 62 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 AL049539.1-201ENST00000611964 459 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 Z82209.2-201ENST00000623410 2012 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 AL359091.1-201ENST00000449048 1734 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOPBP1Q92547 FO082842.1-201ENST00000423552 1370 ntBASIC9.98□□□□□ -0.81
TOPBP1Q92547 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
TOPBP1Q92547 RNA5SP131-201ENST00000365452 119 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 AL590762.4-201ENST00000425885 253 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 RPL23AP60-201ENST00000450011 454 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 AC008115.3-201ENST00000614874 549 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms