Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 RNA5SP394-201ENST00000364216 119 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 DUTP7-201ENST00000507982 486 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 WBP1LP3-201ENST00000523033 208 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 HMGN2P36-201ENST00000529541 409 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 AC091078.2-201ENST00000557145 559 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 AC020916.2-201ENST00000591242 360 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 AL445647.2-201ENST00000615170 130 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC092821.2-201ENST00000545710 2042 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 HMGB1P20-201ENST00000402555 677 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 NPM1P4-201ENST00000414095 812 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC092967.1-201ENST00000449016 481 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC006539.1-201ENST00000481419 501 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC093270.2-201ENST00000486157 792 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 RPL32P9-201ENST00000487963 407 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 EIF3LP3-201ENST00000495197 822 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 AC141002.1-201ENST00000607025 279 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 AL035661.1-201ENST00000620459 1144 ntBASIC7.42□□□□□ -1.22
SNED1Q8TER0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.42□□□□□ -1.22
SNED1Q8TER0 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNED1Q8TER0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC016739.1-201ENST00000405359 345 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 PTMAP6-201ENST00000439110 327 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC093166.4-201ENST00000457867 318 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 RPS17P15-201ENST00000475609 349 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC008536.1-201ENST00000602872 669 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC097467.4-201ENST00000605504 141 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC211433.2-201ENST00000608433 387 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC079395.2-201ENST00000610982 737 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 AL445649.1-201ENST00000615941 691 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 RN7SL544P-201ENST00000617232 284 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 RN7SL763P-201ENST00000620922 284 ntBASIC7.41□□□□□ -1.22
SNED1Q8TER0 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNED1Q8TER0 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 AC024587.1-201ENST00000505925 2157 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms