Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MIR550A3-201ENST00000390735 95 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 RN7SKP125-201ENST00000410481 302 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 RPL35AP3-201ENST00000414680 288 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 CFL1P1-202ENST00000432948 411 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 MORF4-201ENST00000447135 971 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 AC024558.1-201ENST00000505008 528 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 SNORA70D-201ENST00000578836 135 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 AC090510.2-201ENST00000617465 629 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 PARP4P2-201ENST00000446672 3326 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 AC011416.1-201ENST00000514947 1732 ntBASIC5.21□□□□□ -1.58
CCDC168Q8NDH2 FBXL21-201ENST00000297158 1305 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 TMEM75-201ENST00000624314 2165 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 RBBP4P4-201ENST00000398588 1289 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL109941.1-201ENST00000401925 229 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC245096.1-201ENST00000413104 546 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 RPL35AP31-201ENST00000418340 337 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC093890.1-201ENST00000502554 540 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 FXNP1-201ENST00000555153 337 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC005332.4-201ENST00000592752 579 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL512329.2-201ENST00000607350 548 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC012254.3-201ENST00000591183 2117 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AF287957.1-201ENST00000607368 1595 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 NEK2P2-201ENST00000438441 1338 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 USP13-203ENST00000496897 2747 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL645733.1-201ENST00000402250 217 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 GEMIN2P1-201ENST00000454246 752 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 HMGN2P6-201ENST00000551091 273 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL445222.1-201ENST00000607259 628 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL691477.1-201ENST00000624398 162 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 AC022819.1-201ENST00000563495 3910 ntBASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC168Q8NDH2 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC168Q8NDH2 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC168Q8NDH2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC168Q8NDH2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC168Q8NDH2 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC168Q8NDH2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms