Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL031601.1-201ENST00000605702 394 ntBASIC9.46□□□□□ -0.9
VPS8Q8N3P4 AP001962.1-201ENST00000624114 559 ntBASIC9.46□□□□□ -0.9
VPS8Q8N3P4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS8Q8N3P4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AC084782.1-201ENST00000564401 2465 ntBASIC9.45□□□□□ -0.9
VPS8Q8N3P4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AC091305.2-201ENST00000624049 1576 ntBASIC9.45□□□□□ -0.9
VPS8Q8N3P4 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 SELENOWP1-201ENST00000322792 252 ntBASIC9.45□□□□□ -0.9
VPS8Q8N3P4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 HNRNPA1P18-201ENST00000433537 927 ntBASIC9.45□□□□□ -0.9
VPS8Q8N3P4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 OR56A7P-201ENST00000524865 941 ntBASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 MIR132-201ENST00000591554 101 ntBASIC9.45□□□□□ -0.9
VPS8Q8N3P4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 5S_rRNA.28-201ENST00000638107 119 ntBASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AC116667.2-201ENST00000641075 823 ntBASIC9.45□□□□□ -0.9
VPS8Q8N3P4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS8Q8N3P4 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 Z93929.1-201ENST00000418200 1475 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 AC016739.1-201ENST00000405359 345 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 RN7SKP151-201ENST00000410230 316 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 RNA5SP251-201ENST00000410614 137 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 RPL36P18-201ENST00000419316 318 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 AC016027.5-201ENST00000427227 210 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 AL162739.1-201ENST00000450606 307 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 AL356801.1-201ENST00000559320 294 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 MIR6861-201ENST00000618657 64 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC9.44□□□□□ -0.9
VPS8Q8N3P4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
VPS8Q8N3P4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 RN7SKP292-201ENST00000365522 317 ntBASIC9.43□□□□□ -0.9
VPS8Q8N3P4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 BX323845.3-201ENST00000428215 527 ntBASIC9.43□□□□□ -0.9
VPS8Q8N3P4 RPS12P17-201ENST00000438591 377 ntBASIC9.43□□□□□ -0.9
VPS8Q8N3P4 AC011476.1-201ENST00000466725 307 ntBASIC9.43□□□□□ -0.9
VPS8Q8N3P4 RPL38P3-201ENST00000484463 213 ntBASIC9.43□□□□□ -0.9
VPS8Q8N3P4 AC008629.2-201ENST00000503783 483 ntBASIC9.43□□□□□ -0.9
VPS8Q8N3P4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
VPS8Q8N3P4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms