Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 KATNBL1P2-201ENST00000433311 835 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 TUBB4BP6-201ENST00000437576 479 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 RPS26P39-201ENST00000469206 341 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 RPA2P1-201ENST00000556557 721 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC092121.1-201ENST00000569452 202 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC027229.1-201ENST00000583887 253 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 MIR6809-201ENST00000612189 116 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC079414.3-201ENST00000612986 1090 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 OR7A1P-202ENST00000641542 1158 ntBASIC7.77□□□□□ -1.17
SYNE4Q8N205 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SYNE4Q8N205 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE4Q8N205 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC011416.1-201ENST00000514947 1732 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 NPM1P10-201ENST00000398310 865 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 AL445238.1-204ENST00000400311 463 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 RPL36AP39-201ENST00000445859 318 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 CFL1P4-201ENST00000451536 498 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC092905.1-201ENST00000467527 949 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC008429.4-201ENST00000521201 182 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC007066.2-202ENST00000566531 914 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 BNIP3P32-201ENST00000600015 554 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC008147.4-201ENST00000617570 1204 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 AC096708.4-201ENST00000620563 552 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 AL049767.1-202ENST00000637826 242 ntBASIC7.76□□□□□ -1.17
SYNE4Q8N205 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE4Q8N205 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE4Q8N205 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE4Q8N205 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE4Q8N205 AC008937.3-201ENST00000606813 1700 ntBASIC7.75□□□□□ -1.17
SYNE4Q8N205 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.75□□□□□ -1.17
SYNE4Q8N205 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE4Q8N205 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE4Q8N205 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE4Q8N205 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SYNE4Q8N205 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SYNE4Q8N205 U3.25-201ENST00000391209 220 ntBASIC7.75□□□□□ -1.17
SYNE4Q8N205 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE4Q8N205 OR6C71P-201ENST00000432580 913 ntBASIC7.75□□□□□ -1.17
SYNE4Q8N205 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNE4Q8N205 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.75□□□□□ -1.17
SYNE4Q8N205 AL355355.1-201ENST00000442900 793 ntBASIC7.75□□□□□ -1.17
SYNE4Q8N205 GAPDHP23-201ENST00000444823 993 ntBASIC7.75□□□□□ -1.17
SYNE4Q8N205 ZNF619P1-201ENST00000446539 752 ntBASIC7.75□□□□□ -1.17
SYNE4Q8N205 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SYNE4Q8N205 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE4Q8N205 AC090958.1-201ENST00000511122 351 ntBASIC7.75□□□□□ -1.17
SYNE4Q8N205 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms