Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC71Q8IV32 BIN2P1-201ENST00000504996 1530 ntBASIC5.94□□□□□ -1.46
CCDC71Q8IV32 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 SNORA38B-201ENST00000363524 131 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AL360013.1-201ENST00000419031 858 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 VN1R20P-201ENST00000425215 966 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC115283.1-201ENST00000427353 400 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 BTG3P1-201ENST00000435859 716 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 UBBP5-201ENST00000446970 266 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC103563.5-201ENST00000455643 364 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 IGKV2-4-201ENST00000523070 340 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 TOMM20P1-201ENST00000534518 427 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC026956.1-201ENST00000558741 396 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC092718.4-201ENST00000566639 716 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AP001264.1-201ENST00000620602 703 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 MRPL57P1-201ENST00000621486 265 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 MIR1910-201ENST00000636955 80 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 ZNF101P1-201ENST00000435701 1720 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 PSMC1P6-201ENST00000477233 1319 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 LINC01613-201ENST00000561476 2780 ntBASIC5.93□□□□□ -1.46
CCDC71Q8IV32 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC71Q8IV32 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 IFIT1P1-201ENST00000400497 1449 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 MTND5P12-201ENST00000502851 1449 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 RNA5SP431-201ENST00000410312 120 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 U3.43-201ENST00000410734 213 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 HMGA1P8-201ENST00000414130 321 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 MRPS21P5-201ENST00000417885 231 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 CYP4F30P-202ENST00000420048 405 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 GAPDHP59-201ENST00000435908 267 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 RPS10P18-201ENST00000442662 495 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AL022237.1-201ENST00000446663 358 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 SNX18P26-201ENST00000458433 740 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 OR52H2P-201ENST00000514607 902 ntBASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC71Q8IV32 AC135983.3-201ENST00000528049 1226 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms