Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 AC006530.1-201ENST00000555980 571 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 AC245505.1-201ENST00000556398 224 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDH1Q08174 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AL606834.2-201ENST00000602954 668 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AL137190.1-201ENST00000603288 282 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AC129492.5-201ENST00000603489 315 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AL109918.2-201ENST00000605188 279 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AL022238.3-201ENST00000609279 443 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 RN7SL680P-201ENST00000620379 299 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 MTCO1P18-201ENST00000455518 1419 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 AP005139.1-201ENST00000580702 1647 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AL603750.1-201ENST00000624216 1717 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH1Q08174 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH1Q08174 RNU6-1119P-201ENST00000384349 108 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PCDH1Q08174 RN7SKP142-201ENST00000411236 328 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 NENFP1-201ENST00000419476 466 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AL139415.2-201ENST00000431968 163 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 SUMO2P8-201ENST00000434672 286 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 NDUFS5P5-201ENST00000437256 321 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AL020997.1-201ENST00000446554 349 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 RPL5P32-201ENST00000454085 879 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 SETP11-201ENST00000473027 690 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AC104763.1-201ENST00000475274 360 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC009153.1-201ENST00000485799 496 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.28□□□□□ -1.24
PCDH1Q08174 NPY6R-201ENST00000503807 1112 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC006070.1-201ENST00000508151 193 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 SNORA31.13-201ENST00000516624 135 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AP003385.2-201ENST00000524910 973 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AP005597.2-201ENST00000526238 341 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 OR7E87P-201ENST00000532397 929 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AP000619.3-201ENST00000535634 1127 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 NPM1P5-201ENST00000557228 838 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 MRPL45P2-203ENST00000573318 473 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 WISP1-OT1-201ENST00000602893 642 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AC128687.1-201ENST00000605304 619 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AL592148.2-201ENST00000612210 372 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 RN7SL820P-201ENST00000616437 299 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC022140.2-201ENST00000623500 188 ntBASIC7.28□□□□□ -1.24
PCDH1Q08174 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH1Q08174 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms