Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 DNM1P47-203ENST00000571780 12667 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC023245.2-201ENST00000530760 2978 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 OR10AB1P-202ENST00000641219 1686 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 MAPK10-261ENST00000641050 3109 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CX3CL1P78423 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CL1P78423 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 RNA5SP140-201ENST00000364524 92 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 SNORA27.3-201ENST00000364937 134 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 CXADRP1-201ENST00000398098 1095 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 RNU2-72P-201ENST00000411175 163 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 CBX1P3-201ENST00000413296 527 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 SEPT7P8-201ENST00000413308 775 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AL359092.1-201ENST00000417156 265 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC006509.1-201ENST00000420788 634 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 CDC42P6-201ENST00000421246 576 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AL390879.2-203ENST00000426943 1121 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CL1P78423 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AL691517.1-201ENST00000440833 1235 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 GAPDHP33-201ENST00000443168 1013 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 DNAJC19P5-201ENST00000443295 316 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 MTND6P5-201ENST00000448266 512 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC022730.1-201ENST00000473114 568 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 RN7SL790P-201ENST00000474043 298 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 RPL5P33-201ENST00000487833 905 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.23□□□□□ -1.57
CX3CL1P78423 RNU2-45P-201ENST00000516068 187 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 RNU6-467P-201ENST00000517027 110 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC008429.2-201ENST00000523057 864 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AC131935.1-201ENST00000524621 333 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 OR4C49P-201ENST00000563891 900 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 MIR4420-201ENST00000583944 77 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CL1P78423 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC245052.7-201ENST00000601161 359 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 BUB1P1-201ENST00000603541 607 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AC012175.1-201ENST00000603755 531 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AC092574.1-201ENST00000609771 420 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 CXADRP3-202ENST00000617265 1100 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 LINC00216-201ENST00000623548 1126 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AC018692.2-201ENST00000624130 348 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AC106730.3-201ENST00000624568 641 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.23□□□□□ -1.57
CX3CL1P78423 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 HSPD1P8-201ENST00000400121 1658 ntBASIC5.23□□□□□ -1.57
CX3CL1P78423 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CX3CL1P78423 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CL1P78423 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CL1P78423 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CX3CL1P78423 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms