Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.26□□□□□ -1.57
AP3S2P59780 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
AP3S2P59780 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
AP3S2P59780 AC005224.3-201ENST00000584683 2140 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.26□□□□□ -1.57
AP3S2P59780 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.26□□□□□ -1.57
AP3S2P59780 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 CBX1P3-201ENST00000413296 527 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.26□□□□□ -1.57
AP3S2P59780 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.26□□□□□ -1.57
AP3S2P59780 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC5.26□□□□□ -1.57
AP3S2P59780 NPM1P18-201ENST00000434232 732 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.26□□□□□ -1.57
AP3S2P59780 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC5.26□□□□□ -1.57
AP3S2P59780 RPL23AP60-201ENST00000450011 454 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.26□□□□□ -1.57
AP3S2P59780 AC073594.1-201ENST00000462065 364 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.26□□□□□ -1.57
AP3S2P59780 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.26□□□□□ -1.57
AP3S2P59780 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.26□□□□□ -1.57
AP3S2P59780 AC007068.2-201ENST00000543168 395 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 AC245052.7-201ENST00000601161 359 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 AL035417.2-201ENST00000603887 796 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.26□□□□□ -1.57
AP3S2P59780 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.26□□□□□ -1.57
AP3S2P59780 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.26□□□□□ -1.57
AP3S2P59780 AL136984.1-201ENST00000607611 1893 ntBASIC5.26□□□□□ -1.57
AP3S2P59780 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.26□□□□□ -1.57
AP3S2P59780 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.25□□□□□ -1.57
AP3S2P59780 AC093849.1-201ENST00000563631 2209 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
AP3S2P59780 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
AP3S2P59780 SMG1P5-202ENST00000529428 4219 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 SMG1P2-201ENST00000566127 4221 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
AP3S2P59780 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.25□□□□□ -1.57
AP3S2P59780 AC010266.2-201ENST00000564741 3255 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.25□□□□□ -1.57
AP3S2P59780 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
AP3S2P59780 TRAV35-201ENST00000390462 330 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 AC002367.1-201ENST00000416765 405 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.25□□□□□ -1.57
AP3S2P59780 RPSAP59-201ENST00000421048 890 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 CUBNP2-201ENST00000443534 1139 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.25□□□□□ -1.57
AP3S2P59780 MORF4-201ENST00000447135 971 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.25□□□□□ -1.57
AP3S2P59780 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.25□□□□□ -1.57
AP3S2P59780 RSU1P1-201ENST00000453416 441 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 AC079193.1-201ENST00000460497 588 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.25□□□□□ -1.57
AP3S2P59780 RN7SL197P-201ENST00000466981 299 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC5.25□□□□□ -1.57
AP3S2P59780 RN7SL647P-201ENST00000485429 300 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 RN7SL714P-201ENST00000487050 298 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 RPL23AP40-201ENST00000487630 390 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 NPM1P28-201ENST00000492269 840 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC5.25□□□□□ -1.57
AP3S2P59780 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.25□□□□□ -1.57
AP3S2P59780 SNORA70.11-201ENST00000515987 138 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 SNORA70.13-201ENST00000516116 138 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.25□□□□□ -1.57
AP3S2P59780 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.25□□□□□ -1.57
AP3S2P59780 AC009729.1-201ENST00000548873 1133 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.25□□□□□ -1.57
AP3S2P59780 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.25□□□□□ -1.57
AP3S2P59780 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
AP3S2P59780 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 AC027216.1-201ENST00000577726 685 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 MIR378C-201ENST00000578683 81 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 RN7SL664P-201ENST00000584239 305 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 AC099654.6-201ENST00000636487 512 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
AP3S2P59780 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 DDX18P6-201ENST00000450119 1997 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP3S2P59780 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.25□□□□□ -1.57
AP3S2P59780 AL161756.3-201ENST00000641216 2071 ntBASIC5.25□□□□□ -1.57
AP3S2P59780 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms