Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.64□□□□□ -1.51
CLDN18P56856 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.64□□□□□ -1.51
CLDN18P56856 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN18P56856 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 AC002310.3-201ENST00000569728 723 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 AC134669.1-201ENST00000581275 672 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 AC241377.1-201ENST00000619797 406 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLDN18P56856 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 AL117378.2-201ENST00000622916 1337 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
CLDN18P56856 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.64□□□□□ -1.51
CLDN18P56856 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 AC073365.1-203ENST00000641055 1992 ntBASIC5.64□□□□□ -1.51
CLDN18P56856 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLDN18P56856 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.64□□□□□ -1.51
CLDN18P56856 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN18P56856 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CLDN18P56856 AL157831.2-201ENST00000564681 3095 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 AC093297.3-201ENST00000607056 2517 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 RNA5SP478-201ENST00000364657 115 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 RNA5SP115-201ENST00000411160 107 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.63□□□□□ -1.51
CLDN18P56856 PSMD10P2-201ENST00000432890 672 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 PCNPP2-201ENST00000441651 455 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 AP002884.1-201ENST00000479691 655 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 RPL34P33-201ENST00000486062 334 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 OR7E99P-201ENST00000505750 922 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 AP004607.6-201ENST00000525033 1202 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.63□□□□□ -1.51
CLDN18P56856 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.63□□□□□ -1.51
CLDN18P56856 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.63□□□□□ -1.51
CLDN18P56856 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN18P56856 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.63□□□□□ -1.51
CLDN18P56856 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLDN18P56856 AL591167.1-201ENST00000607321 456 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 AC073389.3-201ENST00000609434 935 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 AC024255.1-201ENST00000614376 102 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN18P56856 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 AC112243.1-201ENST00000623949 3851 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 GUCY1B2-204ENST00000531898 1979 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN18P56856 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.63□□□□□ -1.51
CLDN18P56856 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLDN18P56856 AC104966.1-201ENST00000467010 1464 ntBASIC5.63□□□□□ -1.51
CLDN18P56856 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.63□□□□□ -1.51
CLDN18P56856 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CLDN18P56856 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN18P56856 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.62□□□□□ -1.51
CLDN18P56856 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CLDN18P56856 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN18P56856 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN18P56856 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLDN18P56856 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CLDN18P56856 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN18P56856 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN18P56856 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN18P56856 AC007159.1-201ENST00000566529 4706 ntBASIC5.62□□□□□ -1.51
CLDN18P56856 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CLDN18P56856 RNA5SP333-201ENST00000363466 118 ntBASIC5.62□□□□□ -1.51
CLDN18P56856 RNU1-49P-201ENST00000363468 159 ntBASIC5.62□□□□□ -1.51
CLDN18P56856 RNA5SP334-201ENST00000364825 118 ntBASIC5.62□□□□□ -1.51
CLDN18P56856 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CLDN18P56856 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms