Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH13P55290 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH13P55290 CDY11P-201ENST00000447168 1651 ntBASIC6.11□□□□□ -1.43
CDH13P55290 AL132656.3-201ENST00000606384 1595 ntBASIC6.11□□□□□ -1.43
CDH13P55290 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH13P55290 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH13P55290 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH13P55290 ZNF37CP-201ENST00000406795 241 ntBASIC6.11□□□□□ -1.43
CDH13P55290 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH13P55290 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 DNAJC19P5-201ENST00000443295 316 ntBASIC6.11□□□□□ -1.43
CDH13P55290 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 OR52I1-201ENST00000450052 1050 ntBASIC6.11□□□□□ -1.43
CDH13P55290 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH13P55290 RN7SL413P-201ENST00000482700 297 ntBASIC6.11□□□□□ -1.43
CDH13P55290 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH13P55290 AC010343.2-201ENST00000510162 224 ntBASIC6.11□□□□□ -1.43
CDH13P55290 RNA5SP418-201ENST00000515951 117 ntBASIC6.11□□□□□ -1.43
CDH13P55290 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH13P55290 MIR4420-201ENST00000583944 77 ntBASIC6.11□□□□□ -1.43
CDH13P55290 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH13P55290 MIR7159-201ENST00000620587 66 ntBASIC6.11□□□□□ -1.43
CDH13P55290 AC063952.1-203ENST00000634410 658 ntBASIC6.11□□□□□ -1.43
CDH13P55290 AC003992.1-201ENST00000635364 557 ntBASIC6.11□□□□□ -1.43
CDH13P55290 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH13P55290 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH13P55290 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 RN7SKP129-201ENST00000410288 299 ntBASIC6.1□□□□□ -1.43
CDH13P55290 AC117434.1-201ENST00000419971 836 ntBASIC6.1□□□□□ -1.43
CDH13P55290 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 HMGB1P32-201ENST00000425971 565 ntBASIC6.1□□□□□ -1.43
CDH13P55290 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH13P55290 LDHAP2-201ENST00000437325 985 ntBASIC6.1□□□□□ -1.43
CDH13P55290 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 GAPDHP37-201ENST00000442317 968 ntBASIC6.1□□□□□ -1.43
CDH13P55290 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH13P55290 RANP2-201ENST00000456833 229 ntBASIC6.1□□□□□ -1.43
CDH13P55290 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH13P55290 RN7SL83P-201ENST00000468131 297 ntBASIC6.1□□□□□ -1.43
CDH13P55290 RN7SL790P-201ENST00000474043 298 ntBASIC6.1□□□□□ -1.43
CDH13P55290 DEFB109A-201ENST00000482450 265 ntBASIC6.1□□□□□ -1.43
CDH13P55290 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH13P55290 AC147055.1-201ENST00000509261 750 ntBASIC6.1□□□□□ -1.43
CDH13P55290 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH13P55290 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 RNU6-943P-201ENST00000516960 98 ntBASIC6.1□□□□□ -1.43
CDH13P55290 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH13P55290 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH13P55290 AP000919.1-201ENST00000582850 985 ntBASIC6.1□□□□□ -1.43
CDH13P55290 AC027334.1-201ENST00000603257 310 ntBASIC6.1□□□□□ -1.43
CDH13P55290 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 AL136984.1-201ENST00000607611 1893 ntBASIC6.1□□□□□ -1.43
CDH13P55290 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH13P55290 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH13P55290 AC022164.1-201ENST00000568767 2673 ntBASIC6.1□□□□□ -1.43
CDH13P55290 THAP12P8-201ENST00000447914 2115 ntBASIC6.1□□□□□ -1.43
CDH13P55290 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH13P55290 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH13P55290 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
CDH13P55290 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms