Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC012676.3-201ENST00000614983 479 ntBASIC6.43□□□□□ -1.38
CDH6P55285 AL137067.2-201ENST00000621202 131 ntBASIC6.43□□□□□ -1.38
CDH6P55285 AC010325.3-201ENST00000641084 394 ntBASIC6.43□□□□□ -1.38
CDH6P55285 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH6P55285 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CDH6P55285 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH6P55285 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH6P55285 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 AC068769.1-201ENST00000474767 2426 ntBASIC6.42□□□□□ -1.38
CDH6P55285 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 CCAT2-201ENST00000630920 1752 ntBASIC6.42□□□□□ -1.38
CDH6P55285 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CDH6P55285 FAM183DP-201ENST00000421987 399 ntBASIC6.42□□□□□ -1.38
CDH6P55285 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 AC007383.1-201ENST00000445875 636 ntBASIC6.42□□□□□ -1.38
CDH6P55285 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.42□□□□□ -1.38
CDH6P55285 HIGD1AP16-201ENST00000450986 258 ntBASIC6.42□□□□□ -1.38
CDH6P55285 AP001000.1-201ENST00000526843 742 ntBASIC6.42□□□□□ -1.38
CDH6P55285 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.42□□□□□ -1.38
CDH6P55285 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.42□□□□□ -1.38
CDH6P55285 BTG1P1-201ENST00000540396 508 ntBASIC6.42□□□□□ -1.38
CDH6P55285 AC005632.2-201ENST00000564271 828 ntBASIC6.42□□□□□ -1.38
CDH6P55285 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 RNU4ATAC-201ENST00000580972 127 ntBASIC6.42□□□□□ -1.38
CDH6P55285 SETP3-201ENST00000581726 813 ntBASIC6.42□□□□□ -1.38
CDH6P55285 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH6P55285 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH6P55285 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CDH6P55285 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH6P55285 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 AC024587.1-201ENST00000505925 2157 ntBASIC6.41□□□□□ -1.38
CDH6P55285 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH6P55285 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDH6P55285 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH6P55285 AL451142.1-201ENST00000375867 775 ntBASIC6.41□□□□□ -1.38
CDH6P55285 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH6P55285 AC010086.1-201ENST00000437359 1052 ntBASIC6.41□□□□□ -1.38
CDH6P55285 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CDH6P55285 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH6P55285 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH6P55285 SLC25A51P1-201ENST00000468432 871 ntBASIC6.41□□□□□ -1.38
CDH6P55285 H3F3AP5-201ENST00000475267 429 ntBASIC6.41□□□□□ -1.38
CDH6P55285 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 HMGN1P16-201ENST00000508308 283 ntBASIC6.41□□□□□ -1.38
CDH6P55285 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH6P55285 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH6P55285 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH6P55285 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH6P55285 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH6P55285 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH6P55285 RPSAP75-201ENST00000605848 301 ntBASIC6.41□□□□□ -1.38
CDH6P55285 AL162377.2-201ENST00000624532 337 ntBASIC6.41□□□□□ -1.38
CDH6P55285 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH6P55285 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH6P55285 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CDH6P55285 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 AC024651.2-201ENST00000562480 2098 ntBASIC6.41□□□□□ -1.38
CDH6P55285 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CDH6P55285 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH6P55285 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH6P55285 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH6P55285 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH6P55285 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH6P55285 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms