Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
SCN4AP35499 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.25□□□□□ -1.25
SCN4AP35499 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
SCN4AP35499 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.25□□□□□ -1.25
SCN4AP35499 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
SCN4AP35499 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.25□□□□□ -1.25
SCN4AP35499 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.25□□□□□ -1.25
SCN4AP35499 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
SCN4AP35499 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SCN4AP35499 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.25□□□□□ -1.25
SCN4AP35499 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCN4AP35499 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
SCN4AP35499 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 AC113412.1-201ENST00000425840 504 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.24□□□□□ -1.25
SCN4AP35499 CYCSP51-201ENST00000443545 318 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AC084337.1-201ENST00000524809 686 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.24□□□□□ -1.25
SCN4AP35499 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.24□□□□□ -1.25
SCN4AP35499 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 AC007204.2-201ENST00000615022 616 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AC008115.4-201ENST00000619780 775 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AC007683.2-201ENST00000624681 714 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AL132640.3-201ENST00000630473 177 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.24□□□□□ -1.25
SCN4AP35499 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
SCN4AP35499 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCN4AP35499 RN7SKP77-201ENST00000363261 353 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 RN7SKP128-201ENST00000364270 303 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 TNPO1P1-201ENST00000423641 1138 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AL390119.1-201ENST00000440329 312 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 RN7SL547P-201ENST00000490793 290 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.24□□□□□ -1.25
SCN4AP35499 AC106800.2-201ENST00000514009 1103 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
SCN4AP35499 OR8G3P-201ENST00000533406 921 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 AC092865.1-201ENST00000544395 1023 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 AC022919.1-201ENST00000624979 626 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 METTL15-211ENST00000634762 718 ntTSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.24□□□□□ -1.25
SCN4AP35499 AC092111.1-201ENST00000618256 3358 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.24□□□□□ -1.25
SCN4AP35499 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.24□□□□□ -1.25
SCN4AP35499 AC009237.3-203ENST00000442128 3551 ntBASIC7.24□□□□□ -1.25
SCN4AP35499 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 MAPK10-344ENST00000641718 3746 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SCN4AP35499 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.23□□□□□ -1.25
SCN4AP35499 COL6A4P1-202ENST00000487147 4317 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.23□□□□□ -1.25
SCN4AP35499 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.23□□□□□ -1.25
SCN4AP35499 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 MIR550A3-201ENST00000390735 95 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.23□□□□□ -1.25
SCN4AP35499 AL096829.1-201ENST00000413677 457 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 RPL35AP24-201ENST00000413846 330 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 RPA2P2-201ENST00000419698 796 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.23□□□□□ -1.25
SCN4AP35499 AC073850.1-201ENST00000449243 255 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 AC114728.1-201ENST00000488289 483 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.23□□□□□ -1.25
SCN4AP35499 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.23□□□□□ -1.25
SCN4AP35499 CDC42P3-201ENST00000518493 633 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.23□□□□□ -1.25
SCN4AP35499 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.23□□□□□ -1.25
SCN4AP35499 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.23□□□□□ -1.25
SCN4AP35499 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
SCN4AP35499 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.23□□□□□ -1.25
SCN4AP35499 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.23□□□□□ -1.25
SCN4AP35499 MIR6820-201ENST00000611508 62 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms