Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
TM4SF1P30408 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
TM4SF1P30408 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 CCNT2P1-201ENST00000423082 1315 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.61□□□□□ -1.19
TM4SF1P30408 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
TM4SF1P30408 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 RNA5SP478-201ENST00000364657 115 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 HMGB1P20-201ENST00000402555 677 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 NPM1P4-201ENST00000414095 812 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 AL662874.1-201ENST00000426065 230 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.61□□□□□ -1.19
TM4SF1P30408 AC092967.1-201ENST00000449016 481 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 AC114728.1-201ENST00000488289 483 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.61□□□□□ -1.19
TM4SF1P30408 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.61□□□□□ -1.19
TM4SF1P30408 MIR1269B-201ENST00000580405 75 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.61□□□□□ -1.19
TM4SF1P30408 AC015802.2-201ENST00000589690 189 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.61□□□□□ -1.19
TM4SF1P30408 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.61□□□□□ -1.19
TM4SF1P30408 AC092944.2-201ENST00000605443 889 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 AC079395.2-201ENST00000610982 737 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 AC024255.1-201ENST00000614376 102 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 AC118658.2-201ENST00000618697 459 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
TM4SF1P30408 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.61□□□□□ -1.19
TM4SF1P30408 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.61□□□□□ -1.19
TM4SF1P30408 AC110373.1-201ENST00000505994 3505 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TM4SF1P30408 CASC19-205ENST00000641013 1411 ntBASIC7.61□□□□□ -1.19
TM4SF1P30408 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
TM4SF1P30408 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
TM4SF1P30408 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 BX322650.1-201ENST00000332359 2143 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
TM4SF1P30408 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.6□□□□□ -1.19
TM4SF1P30408 SELENOWP1-201ENST00000322792 252 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 RNA5SP350-201ENST00000363298 111 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.6□□□□□ -1.19
TM4SF1P30408 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 GAPDHP58-201ENST00000438477 1006 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 AC016027.4-201ENST00000450866 277 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.6□□□□□ -1.19
TM4SF1P30408 AC073916.1-201ENST00000545095 130 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.6□□□□□ -1.19
TM4SF1P30408 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.6□□□□□ -1.19
TM4SF1P30408 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.6□□□□□ -1.19
TM4SF1P30408 MIR4700-201ENST00000578311 74 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.6□□□□□ -1.19
TM4SF1P30408 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 AC097467.4-201ENST00000605504 141 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 AL137067.2-201ENST00000621202 131 ntBASIC7.6□□□□□ -1.19
TM4SF1P30408 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TM4SF1P30408 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.6□□□□□ -1.19
TM4SF1P30408 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.6□□□□□ -1.19
TM4SF1P30408 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 PDZK1P1-202ENST00000425209 1350 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.59□□□□□ -1.19
TM4SF1P30408 AC109780.1-201ENST00000451768 1344 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
TM4SF1P30408 LRRC37A14P-201ENST00000452297 462 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.59□□□□□ -1.19
TM4SF1P30408 SIAH1P1-201ENST00000479411 923 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 RN7SL57P-201ENST00000493687 290 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 NENFP3-201ENST00000503735 313 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.59□□□□□ -1.19
TM4SF1P30408 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.59□□□□□ -1.19
TM4SF1P30408 CU639417.4-201ENST00000623928 207 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.59□□□□□ -1.19
TM4SF1P30408 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.59□□□□□ -1.19
TM4SF1P30408 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.59□□□□□ -1.19
TM4SF1P30408 AC061975.7-201ENST00000592016 2692 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TM4SF1P30408 AC073429.2-201ENST00000569694 1444 ntBASIC7.59□□□□□ -1.19
TM4SF1P30408 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms