Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A5P29400 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A5P29400 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A5P29400 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
COL4A5P29400 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A5P29400 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A5P29400 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A5P29400 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
COL4A5P29400 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A5P29400 CUBNP2-201ENST00000443534 1139 ntBASIC7.17□□□□□ -1.26
COL4A5P29400 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A5P29400 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.17□□□□□ -1.26
COL4A5P29400 FRG2FP-204ENST00000453982 852 ntBASIC7.17□□□□□ -1.26
COL4A5P29400 AC091685.2-201ENST00000454924 864 ntBASIC7.17□□□□□ -1.26
COL4A5P29400 RPL35AP28-201ENST00000459730 331 ntBASIC7.17□□□□□ -1.26
COL4A5P29400 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.17□□□□□ -1.26
COL4A5P29400 CBX1P5-201ENST00000475330 559 ntBASIC7.17□□□□□ -1.26
COL4A5P29400 AC022215.1-201ENST00000481770 362 ntBASIC7.17□□□□□ -1.26
COL4A5P29400 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.17□□□□□ -1.26
COL4A5P29400 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
COL4A5P29400 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.17□□□□□ -1.26
COL4A5P29400 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A5P29400 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A5P29400 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A5P29400 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
COL4A5P29400 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL4A5P29400 AC004014.2-201ENST00000623718 5122 ntBASIC7.17□□□□□ -1.26
COL4A5P29400 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 AC103591.2-201ENST00000265259 766 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 AP000534.2-201ENST00000412729 568 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 RPS4XP5-201ENST00000419038 768 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A5P29400 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.16□□□□□ -1.26
COL4A5P29400 H2AFZP6-201ENST00000444403 394 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A5P29400 RPS4XP1-201ENST00000482189 787 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 RPS3AP15-201ENST00000483874 781 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 NDUFB5P1-201ENST00000508134 564 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 AC253576.1-201ENST00000511645 1156 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A5P29400 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 AC068870.2-201ENST00000620635 389 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 MIR8080-201ENST00000622224 89 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
COL4A5P29400 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A5P29400 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL4A5P29400 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A5P29400 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL4A5P29400 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
COL4A5P29400 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A5P29400 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A5P29400 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 AC113412.1-201ENST00000425840 504 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 AL022331.1-201ENST00000429025 477 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A5P29400 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A5P29400 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A5P29400 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.16□□□□□ -1.26
COL4A5P29400 AC009120.1-201ENST00000493458 473 ntBASIC7.16□□□□□ -1.26
COL4A5P29400 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A5P29400 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.16□□□□□ -1.26
COL4A5P29400 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.16□□□□□ -1.26
COL4A5P29400 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.16□□□□□ -1.26
COL4A5P29400 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A5P29400 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.15□□□□□ -1.26
COL4A5P29400 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A5P29400 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.15□□□□□ -1.26
COL4A5P29400 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
COL4A5P29400 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
COL4A5P29400 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
COL4A5P29400 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A5P29400 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A5P29400 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A5P29400 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A5P29400 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.15□□□□□ -1.26
COL4A5P29400 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A5P29400 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A5P29400 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
COL4A5P29400 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.15□□□□□ -1.27
COL4A5P29400 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL4A5P29400 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.15□□□□□ -1.27
COL4A5P29400 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.15□□□□□ -1.27
COL4A5P29400 RPL12P3-201ENST00000440080 396 ntBASIC7.15□□□□□ -1.27
COL4A5P29400 RPS26P41-201ENST00000450370 284 ntBASIC7.15□□□□□ -1.27
COL4A5P29400 AC100832.1-201ENST00000471945 383 ntBASIC7.15□□□□□ -1.27
COL4A5P29400 AL355032.1-201ENST00000472981 438 ntBASIC7.15□□□□□ -1.27
COL4A5P29400 BX284632.1-201ENST00000478218 541 ntBASIC7.15□□□□□ -1.27
COL4A5P29400 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
COL4A5P29400 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.15□□□□□ -1.27
COL4A5P29400 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms