Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.2□□□□□ -1.42
CD40P25942 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.2□□□□□ -1.42
CD40P25942 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.2□□□□□ -1.42
CD40P25942 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CD40P25942 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CD40P25942 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.2□□□□□ -1.42
CD40P25942 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 RNA5SP53-201ENST00000391299 120 ntBASIC6.2□□□□□ -1.42
CD40P25942 RNU1-56P-201ENST00000391303 164 ntBASIC6.2□□□□□ -1.42
CD40P25942 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.2□□□□□ -1.42
CD40P25942 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.2□□□□□ -1.42
CD40P25942 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.2□□□□□ -1.42
CD40P25942 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.2□□□□□ -1.42
CD40P25942 VDAC1P10-201ENST00000416715 891 ntBASIC6.2□□□□□ -1.42
CD40P25942 TAF13P2-201ENST00000416876 286 ntBASIC6.2□□□□□ -1.42
CD40P25942 ELOCP9-201ENST00000418624 239 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.2□□□□□ -1.42
CD40P25942 FTLP17-201ENST00000432567 525 ntBASIC6.2□□□□□ -1.42
CD40P25942 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.2□□□□□ -1.42
CD40P25942 RPSAP40-201ENST00000442343 891 ntBASIC6.2□□□□□ -1.42
CD40P25942 PSMC1P13-201ENST00000458195 985 ntBASIC6.2□□□□□ -1.42
CD40P25942 RPS16P9-201ENST00000477220 427 ntBASIC6.2□□□□□ -1.42
CD40P25942 RPL23AP44-201ENST00000482216 473 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC069528.1-202ENST00000482888 637 ntBASIC6.2□□□□□ -1.42
CD40P25942 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.2□□□□□ -1.42
CD40P25942 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.2□□□□□ -1.42
CD40P25942 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.2□□□□□ -1.42
CD40P25942 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.2□□□□□ -1.42
CD40P25942 MTCO1P47-201ENST00000523889 1271 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC109635.6-201ENST00000525487 1113 ntBASIC6.2□□□□□ -1.42
CD40P25942 AP000926.4-201ENST00000527351 454 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC027369.2-201ENST00000528030 440 ntBASIC6.2□□□□□ -1.42
CD40P25942 GLYATL1P4-201ENST00000529326 906 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.2□□□□□ -1.42
CD40P25942 MIR4800-201ENST00000537353 80 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.2□□□□□ -1.42
CD40P25942 RN7SL426P-201ENST00000579106 295 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 SIGLEC31P-201ENST00000594237 551 ntBASIC6.2□□□□□ -1.42
CD40P25942 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 AC009318.3-201ENST00000616916 503 ntBASIC6.2□□□□□ -1.42
CD40P25942 AC087894.3-201ENST00000623682 349 ntBASIC6.2□□□□□ -1.42
CD40P25942 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 LINC01808-202ENST00000641680 1116 ntBASIC6.2□□□□□ -1.42
CD40P25942 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CD40P25942 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.2□□□□□ -1.42
CD40P25942 COL6A4P1-202ENST00000487147 4317 ntBASIC6.2□□□□□ -1.42
CD40P25942 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CD40P25942 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.19□□□□□ -1.42
CD40P25942 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.19□□□□□ -1.42
CD40P25942 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 AC111188.2-201ENST00000529697 1387 ntBASIC6.19□□□□□ -1.42
CD40P25942 NACA-216ENST00000550952 2922 ntTSL 2 BASIC6.19□□□□□ -1.42
CD40P25942 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.19□□□□□ -1.42
CD40P25942 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CD40P25942 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.19□□□□□ -1.42
CD40P25942 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.19□□□□□ -1.42
CD40P25942 AC004014.2-201ENST00000623718 5122 ntBASIC6.19□□□□□ -1.42
CD40P25942 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.19□□□□□ -1.42
CD40P25942 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.19□□□□□ -1.42
CD40P25942 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.19□□□□□ -1.42
CD40P25942 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 RN7SKP55-201ENST00000364888 307 ntBASIC6.19□□□□□ -1.42
CD40P25942 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CD40P25942 RPL23AP59-201ENST00000399415 461 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms