Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH1P12830 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH1P12830 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH1P12830 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.15□□□□□ -1.43
CDH1P12830 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDH1P12830 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CDH1P12830 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CDH1P12830 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH1P12830 AC018628.1-201ENST00000624147 3819 ntBASIC6.14□□□□□ -1.43
CDH1P12830 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH1P12830 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CDH1P12830 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDH1P12830 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH1P12830 AC015799.1-201ENST00000622996 3122 ntBASIC6.14□□□□□ -1.43
CDH1P12830 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH1P12830 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH1P12830 RNA5SP478-201ENST00000364657 115 ntBASIC6.14□□□□□ -1.43
CDH1P12830 YWHAZP4-201ENST00000392459 708 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AL034417.1-201ENST00000399343 800 ntBASIC6.14□□□□□ -1.43
CDH1P12830 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH1P12830 AL360013.1-201ENST00000419031 858 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC117434.1-201ENST00000419971 836 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC002127.1-201ENST00000421305 225 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH1P12830 AC006455.6-201ENST00000426192 893 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH1P12830 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH1P12830 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH1P12830 RARRES2P3-201ENST00000457739 473 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC004890.1-201ENST00000461005 181 ntBASIC6.14□□□□□ -1.43
CDH1P12830 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 RN7SL714P-201ENST00000487050 298 ntBASIC6.14□□□□□ -1.43
CDH1P12830 GM2AP2-201ENST00000491764 562 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH1P12830 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH1P12830 IGKV2-19-201ENST00000518132 283 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH1P12830 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH1P12830 AC063977.7-201ENST00000594454 337 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC006213.5-201ENST00000619673 288 ntBASIC6.14□□□□□ -1.43
CDH1P12830 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH1P12830 MIR6813-201ENST00000621638 56 ntBASIC6.14□□□□□ -1.43
CDH1P12830 MIR6823-201ENST00000622118 61 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 AP001153.1-201ENST00000641024 338 ntBASIC6.14□□□□□ -1.43
CDH1P12830 AC138627.1-204ENST00000641894 765 ntBASIC6.14□□□□□ -1.43
CDH1P12830 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH1P12830 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH1P12830 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH1P12830 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH1P12830 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CDH1P12830 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH1P12830 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH1P12830 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH1P12830 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH1P12830 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CDH1P12830 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH1P12830 RN7SKP184-201ENST00000362348 333 ntBASIC6.13□□□□□ -1.43
CDH1P12830 RNA5SP77-201ENST00000365394 120 ntBASIC6.13□□□□□ -1.43
CDH1P12830 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CDH1P12830 RN7SKP38-201ENST00000410782 309 ntBASIC6.13□□□□□ -1.43
CDH1P12830 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH1P12830 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH1P12830 UBE2V1P14-201ENST00000415815 558 ntBASIC6.13□□□□□ -1.43
CDH1P12830 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH1P12830 RPL21P50-201ENST00000417698 477 ntBASIC6.13□□□□□ -1.43
CDH1P12830 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH1P12830 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH1P12830 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH1P12830 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH1P12830 ARMC4P1-201ENST00000438905 707 ntBASIC6.13□□□□□ -1.43
CDH1P12830 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH1P12830 AC092967.1-201ENST00000449016 481 ntBASIC6.13□□□□□ -1.43
CDH1P12830 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH1P12830 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH1P12830 RPS7P10-201ENST00000464254 603 ntBASIC6.13□□□□□ -1.43
CDH1P12830 SLC25A51P1-201ENST00000468432 871 ntBASIC6.13□□□□□ -1.43
CDH1P12830 OR9A1P-202ENST00000484361 945 ntBASIC6.13□□□□□ -1.43
CDH1P12830 AC114728.1-201ENST00000488289 483 ntBASIC6.13□□□□□ -1.43
CDH1P12830 RN7SL612P-201ENST00000497704 295 ntBASIC6.13□□□□□ -1.43
CDH1P12830 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH1P12830 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.13□□□□□ -1.43
CDH1P12830 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH1P12830 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH1P12830 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms