Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RBMY2EP-202ENST00000456360 940 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 UOX-201ENST00000471089 899 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 AC073648.3-201ENST00000504939 925 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 MTCO1P31-201ENST00000506355 492 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 IGHV3-57-201ENST00000520143 280 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.92□□□□□ -1.14
HMGB1P09429 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.92□□□□□ -1.14
HMGB1P09429 AC130366.1-201ENST00000526505 1192 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 ANP32BP1-202ENST00000568553 737 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 MIR8082-201ENST00000612488 81 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 AC012653.2-201ENST00000621880 420 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.92□□□□□ -1.14
HMGB1P09429 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 PSMC1P4-201ENST00000515236 1327 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 AC095038.1-201ENST00000429248 1591 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 AC092701.1-201ENST00000623627 1551 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
HMGB1P09429 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 AL589826.1-201ENST00000340697 249 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
HMGB1P09429 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 OR5M12P-201ENST00000423388 929 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.91□□□□□ -1.14
HMGB1P09429 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.91□□□□□ -1.14
HMGB1P09429 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.91□□□□□ -1.14
HMGB1P09429 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 RPL26P30-201ENST00000453533 435 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 AL133480.2-201ENST00000456723 487 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 RPL23AP68-201ENST00000480924 445 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 RBBP4P1-201ENST00000502424 1276 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 OR52H2P-201ENST00000514607 902 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 AC010442.1-201ENST00000515583 816 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.91□□□□□ -1.14
HMGB1P09429 IGKV2D-38-201ENST00000518423 240 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
HMGB1P09429 AC011611.6-201ENST00000547483 255 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.91□□□□□ -1.14
HMGB1P09429 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC7.91□□□□□ -1.14
HMGB1P09429 RN7SL657P-201ENST00000582431 293 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.91□□□□□ -1.14
HMGB1P09429 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.91□□□□□ -1.14
HMGB1P09429 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.91□□□□□ -1.14
HMGB1P09429 AL512430.4-201ENST00000603085 613 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 AL953862.2-201ENST00000603089 820 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 AC022613.3-201ENST00000560740 1346 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 AC009501.3-201ENST00000605001 1352 ntBASIC7.91□□□□□ -1.14
HMGB1P09429 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.91□□□□□ -1.14
HMGB1P09429 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.91□□□□□ -1.14
HMGB1P09429 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.91□□□□□ -1.14
HMGB1P09429 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
HMGB1P09429 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.9□□□□□ -1.14
HMGB1P09429 AC027228.2-201ENST00000567141 2154 ntBASIC7.9□□□□□ -1.14
HMGB1P09429 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.9□□□□□ -1.14
HMGB1P09429 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HMGB1P09429 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms