Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC008537.3-201ENST00000623128 1881 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC018880.1-201ENST00000418898 1319 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
PDGFAP04085 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
PDGFAP04085 Y_RNA.88-201ENST00000363029 99 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 RN7SKP50-201ENST00000364694 315 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 AL512430.2-201ENST00000406786 339 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 RNU2-66P-201ENST00000410650 161 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC011753.4-201ENST00000417974 311 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC093107.1-201ENST00000422772 609 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 CYCSP46-201ENST00000423569 204 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 TRIM60P18-201ENST00000441518 828 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 MTND1P16-201ENST00000465177 898 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 PGBD4P1-201ENST00000473644 407 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 SNRPD2P1-201ENST00000489253 354 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 RN7SL416P-201ENST00000494042 298 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 RPL37P25-201ENST00000507308 276 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 GTF2F2P1-201ENST00000511083 675 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC017007.1-201ENST00000511960 415 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC026700.1-201ENST00000512074 544 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 MTCYBP44-201ENST00000514835 823 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.37□□□□□ -1.23
PDGFAP04085 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 AP001124.1-201ENST00000529628 385 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 OR4A21P-201ENST00000532759 944 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC068305.2-201ENST00000550567 1205 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.37□□□□□ -1.23
PDGFAP04085 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 AC012417.1-201ENST00000582307 1039 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC012360.2-201ENST00000609349 391 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC007684.1-201ENST00000609671 477 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC016769.4-201ENST00000616893 535 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AC069209.1-201ENST00000619282 651 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC087565.3-203ENST00000641018 837 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 TARS2P1-201ENST00000506124 2041 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 AL133279.3-201ENST00000563140 2352 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 AL133320.1-201ENST00000621423 2352 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PDGFAP04085 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 AC133552.3-201ENST00000572236 1869 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 MTCO1P6-201ENST00000481192 1384 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
PDGFAP04085 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 TRIM53BP-201ENST00000532912 1720 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 KYNUP2-201ENST00000582280 1329 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 TNFSF15-201ENST00000374044 2789 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms