Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.57□□□□□ -1.36
APOEP02649 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.57□□□□□ -1.36
APOEP02649 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.57□□□□□ -1.36
APOEP02649 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.57□□□□□ -1.36
APOEP02649 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.57□□□□□ -1.36
APOEP02649 AC106822.1-201ENST00000502647 526 ntBASIC6.57□□□□□ -1.36
APOEP02649 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.57□□□□□ -1.36
APOEP02649 KHDC1P1-201ENST00000511053 508 ntBASIC6.57□□□□□ -1.36
APOEP02649 RNA5SP206-201ENST00000516703 121 ntBASIC6.57□□□□□ -1.36
APOEP02649 RNA5SP441-201ENST00000516809 88 ntBASIC6.57□□□□□ -1.36
APOEP02649 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.57□□□□□ -1.36
APOEP02649 AL121579.2-201ENST00000555466 590 ntBASIC6.57□□□□□ -1.36
APOEP02649 AC093524.1-201ENST00000564266 1094 ntBASIC6.57□□□□□ -1.36
APOEP02649 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.57□□□□□ -1.36
APOEP02649 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.57□□□□□ -1.36
APOEP02649 AL078601.3-201ENST00000573303 535 ntBASIC6.57□□□□□ -1.36
APOEP02649 AL359091.2-201ENST00000609303 556 ntBASIC6.57□□□□□ -1.36
APOEP02649 AL135999.3-201ENST00000610501 812 ntBASIC6.57□□□□□ -1.36
APOEP02649 AL137246.2-201ENST00000613439 662 ntBASIC6.57□□□□□ -1.36
APOEP02649 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.57□□□□□ -1.36
APOEP02649 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
APOEP02649 AC011369.2-201ENST00000624423 1567 ntBASIC6.57□□□□□ -1.36
APOEP02649 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.57□□□□□ -1.36
APOEP02649 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.57□□□□□ -1.36
APOEP02649 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
APOEP02649 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.56□□□□□ -1.36
APOEP02649 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
APOEP02649 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
APOEP02649 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 AL139805.1-201ENST00000407837 289 ntBASIC6.56□□□□□ -1.36
APOEP02649 RNA5SP198-201ENST00000410376 127 ntBASIC6.56□□□□□ -1.36
APOEP02649 AC116036.1-201ENST00000412199 367 ntBASIC6.56□□□□□ -1.36
APOEP02649 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.56□□□□□ -1.36
APOEP02649 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.56□□□□□ -1.36
APOEP02649 EEF1B2P3-201ENST00000447718 678 ntBASIC6.56□□□□□ -1.36
APOEP02649 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 VPS25P1-201ENST00000455691 508 ntBASIC6.56□□□□□ -1.36
APOEP02649 AC019084.1-201ENST00000457337 432 ntBASIC6.56□□□□□ -1.36
APOEP02649 RN7SL326P-201ENST00000477493 296 ntBASIC6.56□□□□□ -1.36
APOEP02649 OR7E22P-201ENST00000478335 1035 ntBASIC6.56□□□□□ -1.36
APOEP02649 RPL12P31-201ENST00000478433 450 ntBASIC6.56□□□□□ -1.36
APOEP02649 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.56□□□□□ -1.36
APOEP02649 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.56□□□□□ -1.36
APOEP02649 OR4D12P-201ENST00000509361 911 ntBASIC6.56□□□□□ -1.36
APOEP02649 SNX18P25-201ENST00000510539 758 ntBASIC6.56□□□□□ -1.36
APOEP02649 AC108103.1-201ENST00000511286 446 ntBASIC6.56□□□□□ -1.36
APOEP02649 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.56□□□□□ -1.36
APOEP02649 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.56□□□□□ -1.36
APOEP02649 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.56□□□□□ -1.36
APOEP02649 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.56□□□□□ -1.36
APOEP02649 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.56□□□□□ -1.36
APOEP02649 RPSAP75-201ENST00000605848 301 ntBASIC6.56□□□□□ -1.36
APOEP02649 AC018659.2-201ENST00000624690 715 ntBASIC6.56□□□□□ -1.36
APOEP02649 AL596275.2-207ENST00000641188 675 ntBASIC6.56□□□□□ -1.36
APOEP02649 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.56□□□□□ -1.36
APOEP02649 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.56□□□□□ -1.36
APOEP02649 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.56□□□□□ -1.36
APOEP02649 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.56□□□□□ -1.36
APOEP02649 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.56□□□□□ -1.36
APOEP02649 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.56□□□□□ -1.36
APOEP02649 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
APOEP02649 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APOEP02649 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
APOEP02649 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
APOEP02649 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.55□□□□□ -1.36
APOEP02649 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
APOEP02649 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
APOEP02649 AL157702.1-201ENST00000398764 426 ntBASIC6.55□□□□□ -1.36
APOEP02649 AC099535.1-201ENST00000408928 371 ntBASIC6.55□□□□□ -1.36
APOEP02649 RNA5SP251-201ENST00000410614 137 ntBASIC6.55□□□□□ -1.36
APOEP02649 RN7SKP161-201ENST00000411110 305 ntBASIC6.55□□□□□ -1.36
APOEP02649 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.55□□□□□ -1.36
APOEP02649 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.55□□□□□ -1.36
APOEP02649 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.55□□□□□ -1.36
APOEP02649 AC094019.1-201ENST00000434678 472 ntBASIC6.55□□□□□ -1.36
APOEP02649 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
APOEP02649 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms