Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
TIMP1P01033 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TIMP1P01033 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
TIMP1P01033 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.7□□□□□ -1.34
TIMP1P01033 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.7□□□□□ -1.34
TIMP1P01033 RNA5SP443-201ENST00000363083 132 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 RNU4-34P-201ENST00000410431 124 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 NPM1P4-201ENST00000414095 812 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.7□□□□□ -1.34
TIMP1P01033 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.7□□□□□ -1.34
TIMP1P01033 MORF4L1P5-201ENST00000433352 961 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 AL512593.1-201ENST00000444758 779 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 PFN1P6-201ENST00000476786 399 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 SIAH1P1-201ENST00000479411 923 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 RPS23P1-201ENST00000491662 432 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 AC108693.1-201ENST00000496068 432 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.7□□□□□ -1.34
TIMP1P01033 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.7□□□□□ -1.34
TIMP1P01033 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.7□□□□□ -1.34
TIMP1P01033 OR4A13P-201ENST00000529316 942 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.7□□□□□ -1.34
TIMP1P01033 AC027026.1-201ENST00000532323 742 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.7□□□□□ -1.34
TIMP1P01033 AC044860.2-201ENST00000561005 179 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 AC009120.3-201ENST00000563335 499 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.7□□□□□ -1.34
TIMP1P01033 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.7□□□□□ -1.34
TIMP1P01033 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.7□□□□□ -1.34
TIMP1P01033 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TIMP1P01033 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.7□□□□□ -1.34
TIMP1P01033 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.7□□□□□ -1.34
TIMP1P01033 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.7□□□□□ -1.34
TIMP1P01033 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
TIMP1P01033 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.7□□□□□ -1.34
TIMP1P01033 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 AC012254.3-201ENST00000591183 2117 ntBASIC6.7□□□□□ -1.34
TIMP1P01033 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TIMP1P01033 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.69□□□□□ -1.34
TIMP1P01033 AP002364.1-201ENST00000623330 3386 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
TIMP1P01033 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 RNA5SP46-201ENST00000362370 120 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 U3.7-201ENST00000363668 216 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 NPM1P22-201ENST00000427761 952 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
TIMP1P01033 AC092865.1-201ENST00000544395 1023 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.69□□□□□ -1.34
TIMP1P01033 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.69□□□□□ -1.34
TIMP1P01033 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 AC096861.1-201ENST00000616652 240 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 AF117829.2-201ENST00000619538 361 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.69□□□□□ -1.34
TIMP1P01033 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 CCNT2P1-201ENST00000423082 1315 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TIMP1P01033 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.69□□□□□ -1.34
TIMP1P01033 RPS2P45-201ENST00000469997 2057 ntBASIC6.69□□□□□ -1.34
TIMP1P01033 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
TIMP1P01033 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TIMP1P01033 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.68□□□□□ -1.34
TIMP1P01033 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.68□□□□□ -1.34
TIMP1P01033 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TIMP1P01033 AL161901.1-201ENST00000624954 3425 ntBASIC6.68□□□□□ -1.34
TIMP1P01033 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TIMP1P01033 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TIMP1P01033 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TIMP1P01033 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TIMP1P01033 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.68□□□□□ -1.34
TIMP1P01033 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms