Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MBD4O95243 AC011369.2-201ENST00000624423 1567 ntBASIC7.46□□□□□ -1.22
MBD4O95243 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MBD4O95243 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MBD4O95243 AC011815.2-201ENST00000618230 2021 ntBASIC7.45□□□□□ -1.22
MBD4O95243 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.45□□□□□ -1.22
MBD4O95243 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.45□□□□□ -1.22
MBD4O95243 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 OR3D1P-201ENST00000438288 955 ntBASIC7.45□□□□□ -1.22
MBD4O95243 AMYP1-201ENST00000440059 1023 ntBASIC7.45□□□□□ -1.22
MBD4O95243 GAPDHP23-201ENST00000444823 993 ntBASIC7.45□□□□□ -1.22
MBD4O95243 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.45□□□□□ -1.22
MBD4O95243 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.45□□□□□ -1.22
MBD4O95243 RN7SKP70-201ENST00000516655 271 ntBASIC7.45□□□□□ -1.22
MBD4O95243 IGKV3D-25-201ENST00000519599 235 ntBASIC7.45□□□□□ -1.22
MBD4O95243 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.45□□□□□ -1.22
MBD4O95243 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.45□□□□□ -1.22
MBD4O95243 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.45□□□□□ -1.22
MBD4O95243 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.45□□□□□ -1.22
MBD4O95243 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.45□□□□□ -1.22
MBD4O95243 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.45□□□□□ -1.22
MBD4O95243 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 RN7SL261P-201ENST00000613441 282 ntBASIC7.45□□□□□ -1.22
MBD4O95243 AL512652.1-201ENST00000619006 500 ntBASIC7.45□□□□□ -1.22
MBD4O95243 AC022726.2-201ENST00000634673 547 ntBASIC7.45□□□□□ -1.22
MBD4O95243 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.45□□□□□ -1.22
MBD4O95243 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.45□□□□□ -1.22
MBD4O95243 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
MBD4O95243 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MBD4O95243 AL354854.1-201ENST00000455940 1363 ntBASIC7.45□□□□□ -1.22
MBD4O95243 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.45□□□□□ -1.22
MBD4O95243 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
MBD4O95243 AL117339.4-201ENST00000608335 7063 ntBASIC7.44□□□□□ -1.22
MBD4O95243 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.44□□□□□ -1.22
MBD4O95243 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 AC007406.5-201ENST00000570140 3170 ntBASIC7.44□□□□□ -1.22
MBD4O95243 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
MBD4O95243 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
MBD4O95243 SNORA51.9-201ENST00000384295 124 ntBASIC7.44□□□□□ -1.22
MBD4O95243 RNU11-6P-201ENST00000391127 133 ntBASIC7.44□□□□□ -1.22
MBD4O95243 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
MBD4O95243 SNORA77.2-201ENST00000408571 112 ntBASIC7.44□□□□□ -1.22
MBD4O95243 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.44□□□□□ -1.22
MBD4O95243 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC7.44□□□□□ -1.22
MBD4O95243 AC096754.1-201ENST00000508904 818 ntBASIC7.44□□□□□ -1.22
MBD4O95243 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.44□□□□□ -1.22
MBD4O95243 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.44□□□□□ -1.22
MBD4O95243 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.44□□□□□ -1.22
MBD4O95243 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.44□□□□□ -1.22
MBD4O95243 AP005639.1-201ENST00000526939 192 ntBASIC7.44□□□□□ -1.22
MBD4O95243 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.44□□□□□ -1.22
MBD4O95243 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.44□□□□□ -1.22
MBD4O95243 TOMM20P1-201ENST00000534518 427 ntBASIC7.44□□□□□ -1.22
MBD4O95243 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 AC090286.3-201ENST00000573133 187 ntBASIC7.44□□□□□ -1.22
MBD4O95243 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.44□□□□□ -1.22
MBD4O95243 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.44□□□□□ -1.22
MBD4O95243 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.44□□□□□ -1.22
MBD4O95243 TCL6_3.1-201ENST00000619064 137 ntBASIC7.44□□□□□ -1.22
MBD4O95243 FAM27E2-201ENST00000619668 403 ntBASIC7.44□□□□□ -1.22
MBD4O95243 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
MBD4O95243 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.44□□□□□ -1.22
MBD4O95243 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.44□□□□□ -1.22
MBD4O95243 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.44□□□□□ -1.22
MBD4O95243 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
MBD4O95243 AP001541.1-201ENST00000623322 1904 ntBASIC7.44□□□□□ -1.22
MBD4O95243 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MBD4O95243 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.44□□□□□ -1.22
MBD4O95243 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms