Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC079080.1-201ENST00000479841 822 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 RPL10P7-201ENST00000495649 625 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSSCA1O60232 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.92□□□□□ -1.62
SSSCA1O60232 IGHV4-55-201ENST00000520889 368 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC4.92□□□□□ -1.62
SSSCA1O60232 AL133399.1-201ENST00000527476 298 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 RPL3P13-201ENST00000550415 216 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 RN7SL311P-201ENST00000579858 306 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.92□□□□□ -1.62
SSSCA1O60232 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.92□□□□□ -1.62
SSSCA1O60232 AC114477.1-201ENST00000605097 605 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 AC026333.4-201ENST00000613543 544 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.92□□□□□ -1.62
SSSCA1O60232 RNA5SP439-201ENST00000617595 124 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 KDM5DP1-201ENST00000622542 298 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 AC007347.2-201ENST00000623044 180 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SSSCA1O60232 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSSCA1O60232 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.92□□□□□ -1.62
SSSCA1O60232 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSSCA1O60232 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSSCA1O60232 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSSCA1O60232 AL031595.2-201ENST00000624215 19071 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.92□□□□□ -1.62
SSSCA1O60232 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSSCA1O60232 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SSSCA1O60232 HSPD1P1-201ENST00000503199 1726 ntBASIC4.92□□□□□ -1.62
SSSCA1O60232 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.91□□□□□ -1.62
SSSCA1O60232 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.91□□□□□ -1.62
SSSCA1O60232 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SSSCA1O60232 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SSSCA1O60232 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SSSCA1O60232 RNA5SP375-201ENST00000362975 119 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 RN7SKP191-201ENST00000364713 306 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSSCA1O60232 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSSCA1O60232 EEF1GP6-201ENST00000402309 905 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 VIM2P-201ENST00000402383 1294 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 SOD1P1-201ENST00000407803 440 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 METTL15P3-201ENST00000415522 1221 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 PTCD2P2-201ENST00000415579 1095 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 YWHAZP5-201ENST00000419975 730 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 OR5W1P-201ENST00000423705 938 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 AL589794.1-201ENST00000424971 390 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 GYG1P2-201ENST00000426437 1006 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 BX276092.6-201ENST00000430476 250 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 GTF2IP14-201ENST00000441415 586 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 BX276092.8-201ENST00000455722 250 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 AL133480.2-201ENST00000456723 487 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC4.91□□□□□ -1.62
SSSCA1O60232 ACA64.4-201ENST00000459070 127 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 RPL23AP40-201ENST00000487630 390 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.91□□□□□ -1.62
SSSCA1O60232 CCDC11P1-201ENST00000503137 1162 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 MRPL57P6-201ENST00000506570 309 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC111000.6-201ENST00000514471 709 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 RN7SKP242-201ENST00000515967 289 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC4.91□□□□□ -1.62
SSSCA1O60232 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC093524.1-201ENST00000564266 1094 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 RPS4XP21-201ENST00000603814 750 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 RN7SL261P-201ENST00000613441 282 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 SNX18P12-201ENST00000624821 759 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SSSCA1O60232 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.91□□□□□ -1.62
SSSCA1O60232 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.91□□□□□ -1.62
SSSCA1O60232 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 AC083837.1-201ENST00000565297 2994 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.91□□□□□ -1.62
SSSCA1O60232 PPBPP2-201ENST00000513150 1362 ntBASIC4.91□□□□□ -1.62
SSSCA1O60232 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.91□□□□□ -1.62
SSSCA1O60232 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSSCA1O60232 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
SSSCA1O60232 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SSSCA1O60232 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SSSCA1O60232 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC4.9□□□□□ -1.62
SSSCA1O60232 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms