Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 AC023632.6-201ENST00000624338 2177 ntBASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.76□□□□□ -1.49
TRAPPC4Q9Y296 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 RNA5SP478-201ENST00000364657 115 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AL354868.1-201ENST00000417077 482 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 RPL21P50-201ENST00000417698 477 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC007562.1-201ENST00000421819 517 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC023274.2-201ENST00000445264 521 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 RN7SL643P-201ENST00000471845 291 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AL035690.1-201ENST00000490892 383 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 RN7SL612P-201ENST00000497704 295 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC010343.2-201ENST00000510162 224 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 COX6B1P4-201ENST00000519826 484 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC016590.3-201ENST00000611171 753 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 SAMM50P1-201ENST00000455403 1399 ntBASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRAPPC4Q9Y296 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 CASC19-260ENST00000641828 2001 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 RN7SKP129-201ENST00000410288 299 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 U3.43-201ENST00000410734 213 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC245291.3-201ENST00000443400 292 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AL022319.1-201ENST00000458183 1167 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 RPS7P10-201ENST00000464254 603 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms