Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC104164.1-201ENST00000460282 590 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 RN7SL165P-201ENST00000477476 291 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 OR4A40P-201ENST00000533878 948 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC024255.1-201ENST00000614376 102 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 TCL6_3.1-201ENST00000619064 137 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AP002833.3-201ENST00000625075 2265 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 U3.7-201ENST00000363668 216 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 RNU4-34P-201ENST00000410431 124 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 OR2AT2P-201ENST00000413438 905 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AL445928.1-201ENST00000435545 222 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 HMGN2P36-201ENST00000529541 409 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 OR4H6P-201ENST00000563771 921 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AL021918.2-201ENST00000613415 194 ntBASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
SHANK2Q9UPX8 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AP000866.6-201ENST00000638898 3579 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC011815.2-201ENST00000618230 2021 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 SNORA70-201ENST00000384436 135 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AK4P4-201ENST00000419465 646 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 BX119321.1-201ENST00000428912 797 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 ELOCP3-201ENST00000439303 348 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 RPS23P6-201ENST00000466136 431 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC068522.1-201ENST00000482895 345 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC027026.1-201ENST00000532323 742 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC015802.2-201ENST00000589690 189 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 CASC19-222ENST00000641321 1173 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 OR8G3P-202ENST00000641572 1255 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC241584.2-201ENST00000637142 2090 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 AC092725.2-201ENST00000567658 1389 ntBASIC9.07□□□□□ -0.96
SHANK2Q9UPX8 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 AC106872.5-201ENST00000508856 1416 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 RNA5SP211-201ENST00000365516 117 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 RN7SKP166-201ENST00000410812 305 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 RPL23AP60-201ENST00000450011 454 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 COPS8P2-201ENST00000473228 627 ntBASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC9.06□□□□□ -0.96
SHANK2Q9UPX8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms