Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 MTCO1P25-201ENST00000414449 1799 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 TNPO1P2-201ENST00000426249 2665 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 COX6B1P3-201ENST00000312310 260 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 RPL7P58-201ENST00000402913 758 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 GAPDHP75-201ENST00000433910 943 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 PNKDP1-201ENST00000435914 430 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC018638.3-201ENST00000461273 132 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 RN7SL221P-201ENST00000466190 281 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 RN7SL561P-201ENST00000488553 281 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 SNX18P24-201ENST00000505249 671 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 GOLGA5P1-201ENST00000507317 980 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 RNU6-1334P-201ENST00000516032 105 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 RNA5SP206-201ENST00000516703 121 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 MIR4433B-201ENST00000581329 102 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AL583832.1-201ENST00000603227 784 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC008691.1-209ENST00000642094 814 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC074141.1-201ENST00000588129 2995 ntBASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.41□□□□□ -1.38
TM9SF3Q9HD45 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AL022323.4-201ENST00000623980 13120 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 MAPK10-287ENST00000641217 3037 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 RN7SKP281-201ENST00000410472 352 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 RN7SKP108-201ENST00000411367 328 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 RPS29P14-201ENST00000431518 171 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 MED28P4-201ENST00000433137 572 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AC094019.1-201ENST00000434678 472 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 OR2AF1P-201ENST00000454899 889 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 RPL12P30-201ENST00000488389 499 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 OR7A11P-201ENST00000597719 953 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 AC073046.2-201ENST00000604756 527 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms