Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MTND4P5-201ENST00000435821 1374 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 INTS3-201ENST00000318967 5235 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 U3.7-201ENST00000363668 216 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 U3.30-201ENST00000391308 210 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 MTND4LP20-201ENST00000402379 270 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 Z97634.1-203ENST00000435229 471 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 MTCO3P17-201ENST00000443775 513 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL020997.1-201ENST00000446554 349 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC104651.2-201ENST00000447549 528 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL162395.1-201ENST00000457882 422 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC023194.2-201ENST00000465398 406 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 ARL4AP2-201ENST00000507378 601 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 RNU6-638P-201ENST00000516582 104 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC096708.2-201ENST00000577676 512 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC110760.3-201ENST00000598794 467 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC245052.7-201ENST00000601161 359 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 MTND3P19-201ENST00000603825 345 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC073111.2-201ENST00000605657 1075 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC090772.4-201ENST00000623599 362 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AP000720.1-201ENST00000625091 483 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 ZNF548-202ENST00000366197 4955 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC079753.1-201ENST00000623243 3868 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC122688.4-201ENST00000623279 4394 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 SALL4-201ENST00000217086 5208 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 PPIAP26-201ENST00000377951 522 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL139805.1-201ENST00000407837 289 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL035246.1-201ENST00000433554 1255 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 CDC27P1-201ENST00000445384 715 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AP006222.1-205ENST00000450734 457 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 RN7SL354P-201ENST00000469282 294 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 OR9N1P-201ENST00000491296 333 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 IGBP1P5-201ENST00000507524 1000 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 LDHAP1-201ENST00000509421 992 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 RNA5SP318-201ENST00000516352 92 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 RN7SKP66-201ENST00000516681 231 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC026688.1-201ENST00000520639 1168 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AP001922.4-201ENST00000526967 290 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC136624.4-201ENST00000573044 370 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AL031281.2-201ENST00000606754 748 ntBASIC2.1□□□□□ -2.07
HMCN1Q96RW7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
HMCN1Q96RW7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms