Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RANP2-201ENST00000456833 229 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 AC008026.1-201ENST00000460492 447 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 RPL7P17-201ENST00000470927 724 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 AC079080.1-201ENST00000479841 822 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 AC091544.1-201ENST00000484702 348 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 AC124945.1-201ENST00000485133 188 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
AP3S2P59780 TPM3P3-201ENST00000521343 354 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.28□□□□□ -1.56
AP3S2P59780 AC084824.2-201ENST00000548906 345 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 HIGD1AP9-201ENST00000550710 279 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.28□□□□□ -1.56
AP3S2P59780 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S2P59780 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S2P59780 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S2P59780 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.28□□□□□ -1.56
AP3S2P59780 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.28□□□□□ -1.56
AP3S2P59780 AC002069.2-201ENST00000603580 883 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S2P59780 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.28□□□□□ -1.56
AP3S2P59780 MRPL57P3-201ENST00000619218 176 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 OR7A1P-202ENST00000641542 1158 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S2P59780 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S2P59780 XKRY2-202ENST00000623874 1581 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 XKRY-202ENST00000624960 1581 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S2P59780 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S2P59780 NR1H5P-201ENST00000452683 1377 ntBASIC5.28□□□□□ -1.56
AP3S2P59780 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
AP3S2P59780 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.27□□□□□ -1.57
AP3S2P59780 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.27□□□□□ -1.57
AP3S2P59780 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 OR5E1P-201ENST00000305754 927 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AP3S2P59780 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.27□□□□□ -1.57
AP3S2P59780 MIR197-201ENST00000384976 75 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 RNA5SP176-201ENST00000390956 110 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 RPLP1P10-201ENST00000413972 339 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 AC099670.2-201ENST00000435130 321 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.27□□□□□ -1.57
AP3S2P59780 RPL7AP71-201ENST00000451120 739 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 MED28P7-201ENST00000456611 530 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.27□□□□□ -1.57
AP3S2P59780 SNORA35.1-201ENST00000458908 128 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 RN7SL552P-201ENST00000462094 276 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 DEFB109A-201ENST00000482450 265 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 PDCL3P4-201ENST00000489621 720 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AC105420.1-201ENST00000504389 582 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AC138409.2-202ENST00000507274 458 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
AP3S2P59780 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.27□□□□□ -1.57
AP3S2P59780 AP005902.2-201ENST00000518393 307 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 IGKV2D-38-201ENST00000518423 240 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.27□□□□□ -1.57
AP3S2P59780 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 SETP17-201ENST00000534163 817 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.27□□□□□ -1.57
AP3S2P59780 AL163952.1-202ENST00000569625 600 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.27□□□□□ -1.57
AP3S2P59780 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.27□□□□□ -1.57
AP3S2P59780 AC010503.3-201ENST00000594355 540 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 DYNLL1P1-201ENST00000595442 269 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AC006115.2-201ENST00000596823 202 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.27□□□□□ -1.57
AP3S2P59780 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.27□□□□□ -1.57
AP3S2P59780 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 pRNA.9-201ENST00000618609 89 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 AC099654.15-201ENST00000639802 509 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AP3S2P59780 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AP3S2P59780 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 AC109446.4-201ENST00000623235 2755 ntBASIC5.27□□□□□ -1.57
AP3S2P59780 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.27□□□□□ -1.57
AP3S2P59780 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP3S2P59780 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP3S2P59780 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms