Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 BUB1P1-201ENST00000603541 607 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AC012368.3-201ENST00000604190 219 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 NDUFB9P1-201ENST00000604683 510 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 MIR6889-201ENST00000613185 59 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AC012653.2-201ENST00000621880 420 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CLDN20P56880 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CLDN20P56880 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CLDN20P56880 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN20P56880 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 AC105749.1-201ENST00000631338 2008 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 RNA5SP188-201ENST00000362916 129 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 RNU1-59P-201ENST00000364829 162 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 AL360271.1-201ENST00000395679 510 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 RN7SKP129-201ENST00000410288 299 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN20P56880 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN20P56880 AC096632.2-201ENST00000438139 1239 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN20P56880 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN20P56880 EIF4E2P2-201ENST00000492033 736 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 AC083906.1-201ENST00000509298 406 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN20P56880 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN20P56880 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN20P56880 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN20P56880 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 AC090286.3-201ENST00000573133 187 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN20P56880 SYPL1P2-201ENST00000582878 727 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.88□□□□□ -1.47
CLDN20P56880 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN20P56880 AL589743.6-201ENST00000611025 117 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 U1.25-201ENST00000614085 162 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 U1.34-201ENST00000618578 162 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 U1.31-201ENST00000620022 160 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 AP003400.6-201ENST00000624698 740 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN20P56880 AP001153.1-201ENST00000641024 338 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CLDN20P56880 AC006213.6-201ENST00000623722 4179 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 AC005702.3-201ENST00000585345 1447 ntBASIC5.88□□□□□ -1.47
CLDN20P56880 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN20P56880 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CLDN20P56880 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CLDN20P56880 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN20P56880 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN20P56880 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN20P56880 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN20P56880 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN20P56880 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN20P56880 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN20P56880 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN20P56880 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN20P56880 LCN1P2-201ENST00000372030 223 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 RNU6-891P-201ENST00000384280 111 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 RNU1-46P-201ENST00000384425 164 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 DHFRP5-201ENST00000406944 564 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 TMA16P2-201ENST00000413187 601 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN20P56880 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN20P56880 GPN3P1-201ENST00000423883 535 ntBASIC5.87□□□□□ -1.47
CLDN20P56880 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms