Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL590065.1-201ENST00000603371 4774 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 AC090181.3-201ENST00000624777 1514 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GFRA1P56159 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 AC006042.3-201ENST00000454684 1469 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GFRA1P56159 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GFRA1P56159 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 AL451046.1-201ENST00000406097 534 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 SNORA11D-201ENST00000408548 128 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 SNORA11E-201ENST00000408778 128 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GFRA1P56159 TIMM9P2-201ENST00000419324 266 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GFRA1P56159 HSPE1P16-201ENST00000426640 348 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.56□□□□□ -1.36
GFRA1P56159 HMGB1P48-201ENST00000446155 598 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 MTCO3P16-201ENST00000454456 754 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AC234771.3-201ENST00000454984 622 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GFRA1P56159 RPS4XP19-201ENST00000460237 736 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 RPL23P10-201ENST00000468780 412 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 MTND3P7-201ENST00000474435 343 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.56□□□□□ -1.36
GFRA1P56159 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.56□□□□□ -1.36
GFRA1P56159 IGLVI-42-201ENST00000522485 381 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 MTCO1P49-201ENST00000523429 802 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AP004607.5-201ENST00000532034 217 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 AC010198.2-201ENST00000550612 259 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 NDUFA3P4-201ENST00000560814 250 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 ATP5F1P7-201ENST00000567330 760 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 CCDC58P1-201ENST00000578567 430 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.56□□□□□ -1.36
GFRA1P56159 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 AL590229.1-201ENST00000603497 542 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 COX6CP16-201ENST00000603667 216 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 CR382285.1-202ENST00000604687 547 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AC124312.4-201ENST00000605533 310 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.56□□□□□ -1.36
GFRA1P56159 AL161931.1-201ENST00000612768 246 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AC005277.2-201ENST00000617898 390 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AL121985.2-201ENST00000621192 555 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AC103564.3-201ENST00000621194 220 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 AC007347.2-201ENST00000623044 180 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 CASC19-222ENST00000641321 1173 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 AC005702.3-201ENST00000585345 1447 ntBASIC6.56□□□□□ -1.36
GFRA1P56159 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.56□□□□□ -1.36
GFRA1P56159 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GFRA1P56159 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
GFRA1P56159 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GFRA1P56159 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms