Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC6.44□□□□□ -1.38
BRCA2P51587 AC132068.1-201ENST00000623805 459 ntBASIC6.44□□□□□ -1.38
BRCA2P51587 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
BRCA2P51587 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.44□□□□□ -1.38
BRCA2P51587 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
BRCA2P51587 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
BRCA2P51587 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC6.43□□□□□ -1.38
BRCA2P51587 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.43□□□□□ -1.38
BRCA2P51587 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC008745.1-201ENST00000604064 271 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 EML5-201ENST00000380664 5910 ntTSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.43□□□□□ -1.38
BRCA2P51587 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.43□□□□□ -1.38
BRCA2P51587 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC087516.1-201ENST00000561236 2428 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 SNORA70.2-201ENST00000364506 135 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 SNORA11C-201ENST00000408532 129 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AC006335.2-201ENST00000437993 330 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC109462.1-201ENST00000491087 368 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.43□□□□□ -1.38
BRCA2P51587 RAB9BP1-201ENST00000519581 626 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.43□□□□□ -1.38
BRCA2P51587 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC010327.2-201ENST00000587647 488 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AL513548.2-201ENST00000602994 1207 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.43□□□□□ -1.38
BRCA2P51587 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 AC096921.2-201ENST00000561507 1916 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
BRCA2P51587 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
BRCA2P51587 SNORA17.1-201ENST00000362945 126 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 RNU4-4P-201ENST00000364588 130 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 RNU1-77P-201ENST00000390868 162 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.43□□□□□ -1.38
BRCA2P51587 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC090638.1-201ENST00000498296 909 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 IGBP1P5-201ENST00000507524 1000 ntBASIC6.43□□□□□ -1.38
BRCA2P51587 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.43□□□□□ -1.38
BRCA2P51587 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.43□□□□□ -1.38
BRCA2P51587 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.43□□□□□ -1.38
BRCA2P51587 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.43□□□□□ -1.38
BRCA2P51587 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.42□□□□□ -1.38
BRCA2P51587 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 AC013488.1-201ENST00000526618 1838 ntBASIC6.42□□□□□ -1.38
BRCA2P51587 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 AC010132.2-201ENST00000295493 1043 ntBASIC6.42□□□□□ -1.38
BRCA2P51587 AL133325.1-201ENST00000421090 382 ntBASIC6.42□□□□□ -1.38
BRCA2P51587 TRGV7-201ENST00000427089 353 ntBASIC6.42□□□□□ -1.38
BRCA2P51587 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.42□□□□□ -1.38
BRCA2P51587 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 AL109618.2-201ENST00000605527 211 ntBASIC6.42□□□□□ -1.38
BRCA2P51587 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.42□□□□□ -1.38
BRCA2P51587 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC6.42□□□□□ -1.38
BRCA2P51587 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
BRCA2P51587 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
BRCA2P51587 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BRCA2P51587 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.42□□□□□ -1.38
BRCA2P51587 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 BX119917.1-201ENST00000432517 502 ntBASIC6.42□□□□□ -1.38
BRCA2P51587 AL049872.1-201ENST00000556323 322 ntBASIC6.42□□□□□ -1.38
BRCA2P51587 AL392048.1-201ENST00000613946 534 ntBASIC6.42□□□□□ -1.38
BRCA2P51587 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
BRCA2P51587 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
BRCA2P51587 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCA2P51587 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
BRCA2P51587 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms