Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC106785.3-201ENST00000564064 847 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC090286.3-201ENST00000573133 187 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC6A4P31645 AL953862.2-201ENST00000603089 820 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC005776.1-201ENST00000603164 290 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AL050303.3-201ENST00000613704 284 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 AC008993.2-201ENST00000631744 806 ntBASIC6.72□□□□□ -1.33
SLC6A4P31645 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC6A4P31645 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC6A4P31645 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC6A4P31645 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC6A4P31645 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
SLC6A4P31645 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
SLC6A4P31645 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
SLC6A4P31645 MAPK10-323ENST00000641493 3207 ntBASIC6.71□□□□□ -1.33
SLC6A4P31645 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
SLC6A4P31645 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SLC6A4P31645 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SLC6A4P31645 RPL31P11-201ENST00000426558 1558 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.71□□□□□ -1.34
SLC6A4P31645 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 SNORD35A-201ENST00000363389 86 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 RNU1-46P-201ENST00000384425 164 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 ATP5F1P6-201ENST00000402768 767 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.71□□□□□ -1.34
SLC6A4P31645 MTND4LP21-201ENST00000415303 295 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.71□□□□□ -1.34
SLC6A4P31645 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SLC6A4P31645 RPL23AP85-201ENST00000421838 433 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AL138899.2-201ENST00000439139 499 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AL022319.1-201ENST00000458183 1167 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
SLC6A4P31645 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.71□□□□□ -1.34
SLC6A4P31645 HMGN1P16-201ENST00000508308 283 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.71□□□□□ -1.34
SLC6A4P31645 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 IGKV2-4-201ENST00000523070 340 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.71□□□□□ -1.34
SLC6A4P31645 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.71□□□□□ -1.34
SLC6A4P31645 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AC096947.1-201ENST00000603233 470 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.71□□□□□ -1.34
SLC6A4P31645 MRPL57P1-201ENST00000621486 265 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AL355480.1-201ENST00000629041 99 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 OR4G3P-201ENST00000633500 913 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 LINC02495-203ENST00000636704 242 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.71□□□□□ -1.34
SLC6A4P31645 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.71□□□□□ -1.34
SLC6A4P31645 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.71□□□□□ -1.34
SLC6A4P31645 AC074141.1-201ENST00000588129 2995 ntBASIC6.71□□□□□ -1.34
SLC6A4P31645 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.71□□□□□ -1.34
SLC6A4P31645 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.71□□□□□ -1.34
SLC6A4P31645 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SLC6A4P31645 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.71□□□□□ -1.34
SLC6A4P31645 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.7□□□□□ -1.34
SLC6A4P31645 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SLC6A4P31645 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SLC6A4P31645 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SLC6A4P31645 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 RNA5SP485-201ENST00000365053 119 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 PRELID1P1-201ENST00000403549 660 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AMZ2P2-201ENST00000406819 1057 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AL360013.1-201ENST00000419031 858 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AL121882.1-201ENST00000422893 417 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 MED28P4-201ENST00000433137 572 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.7□□□□□ -1.34
SLC6A4P31645 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
SLC6A4P31645 OFD1P3Y-201ENST00000453312 783 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms