Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.13□□□□□ -1.11
VARSP26640 OR52A4P-201ENST00000472867 958 ntBASIC8.13□□□□□ -1.11
VARSP26640 AP002884.1-201ENST00000479691 655 ntBASIC8.13□□□□□ -1.11
VARSP26640 OR9A3P-202ENST00000485185 878 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC117392.1-201ENST00000487061 596 ntBASIC8.13□□□□□ -1.11
VARSP26640 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 AC138866.1-201ENST00000514522 497 ntBASIC8.13□□□□□ -1.11
VARSP26640 RNA5SP422-201ENST00000516778 111 ntBASIC8.13□□□□□ -1.11
VARSP26640 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.13□□□□□ -1.11
VARSP26640 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.13□□□□□ -1.11
VARSP26640 IGKV2OR22-4-201ENST00000523309 367 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.13□□□□□ -1.11
VARSP26640 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 AP006587.2-201ENST00000530696 493 ntBASIC8.13□□□□□ -1.11
VARSP26640 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 AC018653.2-201ENST00000540190 238 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC073913.2-201ENST00000541512 145 ntBASIC8.13□□□□□ -1.11
VARSP26640 AL121821.2-201ENST00000556081 394 ntBASIC8.13□□□□□ -1.11
VARSP26640 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 AC090515.3-201ENST00000560431 315 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC8.13□□□□□ -1.11
VARSP26640 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.13□□□□□ -1.11
VARSP26640 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC069209.1-201ENST00000619282 651 ntBASIC8.13□□□□□ -1.11
VARSP26640 AC073348.1-201ENST00000623002 331 ntBASIC8.13□□□□□ -1.11
VARSP26640 AL139254.2-202ENST00000641937 1156 ntBASIC8.13□□□□□ -1.11
VARSP26640 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.13□□□□□ -1.11
VARSP26640 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
VARSP26640 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.13□□□□□ -1.11
VARSP26640 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
VARSP26640 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
VARSP26640 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
VARSP26640 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 AL590763.1-201ENST00000398297 1545 ntBASIC8.13□□□□□ -1.11
VARSP26640 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
VARSP26640 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
VARSP26640 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.13□□□□□ -1.11
VARSP26640 CUL4AP1-201ENST00000514750 1863 ntBASIC8.13□□□□□ -1.11
VARSP26640 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
VARSP26640 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
VARSP26640 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.12□□□□□ -1.11
VARSP26640 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
VARSP26640 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 RPL4P3-201ENST00000428881 1311 ntBASIC8.12□□□□□ -1.11
VARSP26640 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
VARSP26640 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC8.12□□□□□ -1.11
VARSP26640 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
VARSP26640 Y_RNA.89-201ENST00000363031 102 ntBASIC8.12□□□□□ -1.11
VARSP26640 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 AC068533.2-201ENST00000411872 306 ntBASIC8.12□□□□□ -1.11
VARSP26640 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
VARSP26640 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC8.12□□□□□ -1.11
VARSP26640 MTCYBP45-201ENST00000435243 565 ntBASIC8.12□□□□□ -1.11
VARSP26640 AC239367.1-201ENST00000439389 936 ntBASIC8.12□□□□□ -1.11
VARSP26640 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC8.12□□□□□ -1.11
VARSP26640 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC8.12□□□□□ -1.11
VARSP26640 AC079776.3-201ENST00000450665 370 ntBASIC8.12□□□□□ -1.11
VARSP26640 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC8.12□□□□□ -1.11
VARSP26640 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC8.12□□□□□ -1.11
VARSP26640 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.12□□□□□ -1.11
VARSP26640 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
VARSP26640 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VARSP26640 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 RNA5SP101-201ENST00000517036 108 ntBASIC8.12□□□□□ -1.11
VARSP26640 AC138356.2-201ENST00000521192 667 ntBASIC8.12□□□□□ -1.11
VARSP26640 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC8.12□□□□□ -1.11
VARSP26640 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.12□□□□□ -1.11
VARSP26640 AP003385.2-201ENST00000524910 973 ntBASIC8.12□□□□□ -1.11
VARSP26640 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC8.12□□□□□ -1.11
VARSP26640 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC8.12□□□□□ -1.11
VARSP26640 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.12□□□□□ -1.11
VARSP26640 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms