Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 AC022507.1-201ENST00000548349 1505 ntBASIC6.39□□□□□ -1.39
HLA-DPA1P20036 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DPA1P20036 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC116158.1-201ENST00000560231 2129 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 MTHFD2P5-201ENST00000320415 844 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 PRELID1P1-201ENST00000403549 660 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 GTF2IP14-201ENST00000441415 586 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 OR2L9P-201ENST00000444456 913 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 COX4I1P2-201ENST00000447446 547 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 VPS25P1-201ENST00000455691 508 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 RN7SL39P-201ENST00000462264 297 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AP002371.1-201ENST00000463604 433 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 RN7SL369P-201ENST00000477138 299 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 GM2AP2-201ENST00000491764 562 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 SUMO2P4-201ENST00000504193 276 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 RNU6-943P-201ENST00000516960 98 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 HMGN2P47-201ENST00000559378 272 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC005332.4-201ENST00000592752 579 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AL589765.6-201ENST00000601909 549 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 NDUFB9P1-201ENST00000604683 510 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AL354950.1-201ENST00000614150 568 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 MIR6811-201ENST00000620409 58 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 MIR6823-201ENST00000622118 61 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC089999.3-201ENST00000622440 577 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC093829.1-201ENST00000506662 1618 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 GUCY1B2-204ENST00000531898 1979 ntBASIC6.38□□□□□ -1.39
HLA-DPA1P20036 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DPA1P20036 AL161901.1-201ENST00000624954 3425 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 RNU11-6P-201ENST00000391127 133 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AL133260.1-201ENST00000405720 405 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 RNA5SP115-201ENST00000411160 107 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 DHFRP2-201ENST00000414224 547 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AL022237.1-201ENST00000446663 358 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 YRDCP3-201ENST00000456507 480 ntBASIC6.37□□□□□ -1.39
HLA-DPA1P20036 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DPA1P20036 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms