Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SUGT1P3-202ENST00000604259 383 ntBASIC10.26□□□□□ -0.77
CFTRP13569 RPSAP73-201ENST00000614820 330 ntBASIC10.26□□□□□ -0.77
CFTRP13569 CASC19-248ENST00000641674 1356 ntBASIC10.26□□□□□ -0.77
CFTRP13569 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CFTRP13569 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CFTRP13569 PARP4P2-201ENST00000446672 3326 ntBASIC10.26□□□□□ -0.77
CFTRP13569 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CFTRP13569 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CFTRP13569 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CFTRP13569 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CFTRP13569 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC10.26□□□□□ -0.77
CFTRP13569 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CFTRP13569 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CFTRP13569 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC10.26□□□□□ -0.77
CFTRP13569 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
CFTRP13569 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC10.25□□□□□ -0.77
CFTRP13569 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CFTRP13569 U3.2-201ENST00000362981 210 ntBASIC10.25□□□□□ -0.77
CFTRP13569 AL121835.1-201ENST00000404250 354 ntBASIC10.25□□□□□ -0.77
CFTRP13569 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC10.25□□□□□ -0.77
CFTRP13569 RPA2P2-201ENST00000419698 796 ntBASIC10.25□□□□□ -0.77
CFTRP13569 AC097721.1-201ENST00000427150 1253 ntBASIC10.25□□□□□ -0.77
CFTRP13569 RPL12P3-201ENST00000440080 396 ntBASIC10.25□□□□□ -0.77
CFTRP13569 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC10.25□□□□□ -0.77
CFTRP13569 AC091685.2-201ENST00000454924 864 ntBASIC10.25□□□□□ -0.77
CFTRP13569 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC10.25□□□□□ -0.77
CFTRP13569 RN7SL30P-201ENST00000488416 306 ntBASIC10.25□□□□□ -0.77
CFTRP13569 AC083795.1-201ENST00000491760 320 ntBASIC10.25□□□□□ -0.77
CFTRP13569 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC10.25□□□□□ -0.77
CFTRP13569 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC10.25□□□□□ -0.77
CFTRP13569 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC10.25□□□□□ -0.77
CFTRP13569 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC10.25□□□□□ -0.77
CFTRP13569 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
CFTRP13569 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
CFTRP13569 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC10.25□□□□□ -0.77
CFTRP13569 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC10.25□□□□□ -0.77
CFTRP13569 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CFTRP13569 AC023421.1-201ENST00000590535 1785 ntBASIC10.25□□□□□ -0.77
CFTRP13569 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CFTRP13569 EEF1A1P14-201ENST00000421195 1376 ntBASIC10.24□□□□□ -0.77
CFTRP13569 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CFTRP13569 RPL35AP24-201ENST00000413846 330 ntBASIC10.24□□□□□ -0.77
CFTRP13569 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC10.24□□□□□ -0.77
CFTRP13569 RPS4XP5-201ENST00000419038 768 ntBASIC10.24□□□□□ -0.77
CFTRP13569 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC10.24□□□□□ -0.77
CFTRP13569 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC10.24□□□□□ -0.77
CFTRP13569 AL606490.1-201ENST00000452266 765 ntBASIC10.24□□□□□ -0.77
CFTRP13569 RN7SL172P-201ENST00000460535 303 ntBASIC10.24□□□□□ -0.77
CFTRP13569 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC10.24□□□□□ -0.77
CFTRP13569 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC10.24□□□□□ -0.77
CFTRP13569 HMGN2P6-201ENST00000551091 273 ntBASIC10.24□□□□□ -0.77
CFTRP13569 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC10.24□□□□□ -0.77
CFTRP13569 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC10.24□□□□□ -0.77
CFTRP13569 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC10.24□□□□□ -0.77
CFTRP13569 OR11H2-202ENST00000641517 1085 ntBASIC10.24□□□□□ -0.77
CFTRP13569 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CFTRP13569 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC10.24□□□□□ -0.77
CFTRP13569 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CFTRP13569 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC10.24□□□□□ -0.77
CFTRP13569 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CFTRP13569 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC10.24□□□□□ -0.77
CFTRP13569 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CFTRP13569 SRRM1P3-201ENST00000426911 2678 ntBASIC10.24□□□□□ -0.77
CFTRP13569 MRRFP1-201ENST00000435941 1675 ntBASIC10.24□□□□□ -0.77
CFTRP13569 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CFTRP13569 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
CFTRP13569 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CFTRP13569 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC10.24□□□□□ -0.77
CFTRP13569 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC10.23□□□□□ -0.77
CFTRP13569 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC10.23□□□□□ -0.77
CFTRP13569 FABP7P2-201ENST00000429946 379 ntBASIC10.23□□□□□ -0.77
CFTRP13569 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC10.23□□□□□ -0.77
CFTRP13569 AC009120.1-201ENST00000493458 473 ntBASIC10.23□□□□□ -0.77
CFTRP13569 OR8G3P-201ENST00000533406 921 ntBASIC10.23□□□□□ -0.77
CFTRP13569 ASB8-202ENST00000535055 657 ntTSL 2 BASIC10.23□□□□□ -0.77
CFTRP13569 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC10.23□□□□□ -0.77
CFTRP13569 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CFTRP13569 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC10.23□□□□□ -0.77
CFTRP13569 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC10.23□□□□□ -0.77
CFTRP13569 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
CFTRP13569 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC10.23□□□□□ -0.77
CFTRP13569 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CFTRP13569 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CFTRP13569 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CFTRP13569 CYP4Z2P-201ENST00000423332 1512 ntBASIC10.23□□□□□ -0.77
CFTRP13569 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
CFTRP13569 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CFTRP13569 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC10.23□□□□□ -0.77
CFTRP13569 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CFTRP13569 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CFTRP13569 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CFTRP13569 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms