Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TOP2AP11388 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TOP2AP11388 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TOP2AP11388 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TOP2AP11388 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
TOP2AP11388 RNA5SP375-201ENST00000362975 119 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 AC099677.3-201ENST00000427081 395 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TOP2AP11388 AC093270.2-201ENST00000486157 792 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC10.48□□□□□ -0.73
TOP2AP11388 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC10.48□□□□□ -0.73
TOP2AP11388 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TOP2AP11388 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
TOP2AP11388 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TOP2AP11388 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
TOP2AP11388 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TOP2AP11388 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC10.48□□□□□ -0.73
TOP2AP11388 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TOP2AP11388 AC012075.1-201ENST00000436549 580 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 SUMO2P1-206ENST00000445436 284 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 FRG2FP-204ENST00000453982 852 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 AC112187.1-201ENST00000455837 479 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TOP2AP11388 SUMO2P7-201ENST00000511179 285 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 MRPS16P1-201ENST00000523462 412 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 KCTD9P4-201ENST00000526766 1166 ntBASIC10.48□□□□□ -0.73
TOP2AP11388 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC10.48□□□□□ -0.73
TOP2AP11388 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
TOP2AP11388 RMST-210ENST00000640149 2844 ntTSL 5 BASIC10.47□□□□□ -0.73
TOP2AP11388 AL049634.1-201ENST00000453770 1720 ntBASIC10.47□□□□□ -0.73
TOP2AP11388 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
TOP2AP11388 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
TOP2AP11388 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
TOP2AP11388 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC10.47□□□□□ -0.73
TOP2AP11388 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
TOP2AP11388 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC10.47□□□□□ -0.73
TOP2AP11388 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
TOP2AP11388 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC10.47□□□□□ -0.73
TOP2AP11388 OR5W1P-201ENST00000423705 938 ntBASIC10.47□□□□□ -0.73
TOP2AP11388 AC103563.5-201ENST00000455643 364 ntBASIC10.47□□□□□ -0.73
TOP2AP11388 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC10.47□□□□□ -0.73
TOP2AP11388 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC10.47□□□□□ -0.73
TOP2AP11388 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC10.47□□□□□ -0.73
TOP2AP11388 CCT5-215ENST00000625723 135 ntTSL 5 BASIC10.47□□□□□ -0.73
TOP2AP11388 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
TOP2AP11388 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
TOP2AP11388 AC053481.2-202ENST00000582394 1500 ntBASIC10.46□□□□□ -0.73
TOP2AP11388 SELE-203ENST00000367775 3389 ntTSL 5 BASIC10.46□□□□□ -0.73
TOP2AP11388 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
TOP2AP11388 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
TOP2AP11388 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC10.46□□□□□ -0.74
TOP2AP11388 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC10.46□□□□□ -0.74
TOP2AP11388 OR6E1P-201ENST00000414424 923 ntBASIC10.46□□□□□ -0.74
TOP2AP11388 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC10.46□□□□□ -0.74
TOP2AP11388 AL390119.1-201ENST00000440329 312 ntBASIC10.46□□□□□ -0.74
TOP2AP11388 LRRC37A14P-201ENST00000452297 462 ntBASIC10.46□□□□□ -0.74
TOP2AP11388 AC083795.1-201ENST00000491760 320 ntBASIC10.46□□□□□ -0.74
TOP2AP11388 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC10.46□□□□□ -0.74
TOP2AP11388 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.46□□□□□ -0.74
TOP2AP11388 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC10.46□□□□□ -0.74
TOP2AP11388 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TOP2AP11388 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TOP2AP11388 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
TOP2AP11388 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
TOP2AP11388 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TOP2AP11388 AC089998.1-201ENST00000548575 3141 ntBASIC10.46□□□□□ -0.74
TOP2AP11388 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
TOP2AP11388 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TOP2AP11388 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC10.46□□□□□ -0.74
TOP2AP11388 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC10.46□□□□□ -0.74
TOP2AP11388 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TOP2AP11388 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
TOP2AP11388 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
TOP2AP11388 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
TOP2AP11388 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
TOP2AP11388 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC10.45□□□□□ -0.74
TOP2AP11388 RN7SL165P-201ENST00000477476 291 ntBASIC10.45□□□□□ -0.74
TOP2AP11388 SNORA43.3-201ENST00000517240 103 ntBASIC10.45□□□□□ -0.74
TOP2AP11388 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
TOP2AP11388 AC211433.2-201ENST00000608433 387 ntBASIC10.45□□□□□ -0.74
TOP2AP11388 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC10.45□□□□□ -0.74
TOP2AP11388 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TOP2AP11388 FTO-215ENST00000636491 1676 ntTSL 5 BASIC10.45□□□□□ -0.74
TOP2AP11388 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TOP2AP11388 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC10.45□□□□□ -0.74
TOP2AP11388 PARP4P2-201ENST00000446672 3326 ntBASIC10.45□□□□□ -0.74
TOP2AP11388 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TOP2AP11388 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC10.45□□□□□ -0.74
TOP2AP11388 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC10.45□□□□□ -0.74
TOP2AP11388 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
TOP2AP11388 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
TOP2AP11388 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC10.44□□□□□ -0.74
TOP2AP11388 RN7SKP59-201ENST00000410520 314 ntBASIC10.44□□□□□ -0.74
TOP2AP11388 SPRYD7P1-201ENST00000443861 570 ntBASIC10.44□□□□□ -0.74
TOP2AP11388 RPL32P9-201ENST00000487963 407 ntBASIC10.44□□□□□ -0.74
TOP2AP11388 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC10.44□□□□□ -0.74
TOP2AP11388 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC10.44□□□□□ -0.74
TOP2AP11388 NRBF2P4-201ENST00000520874 850 ntBASIC10.44□□□□□ -0.74
TOP2AP11388 HMGB1P42-201ENST00000532126 553 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms