Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 HMGN1P20-201ENST00000411849 300 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 SLC20A1P1-201ENST00000413906 956 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AL139415.1-201ENST00000424862 352 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.62□□□□□ -1.51
FREM3P0C091 AL355355.1-201ENST00000442900 793 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 SNX18P26-201ENST00000458433 740 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AC025458.1-201ENST00000506046 166 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AC090568.1-201ENST00000509499 856 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.62□□□□□ -1.51
FREM3P0C091 RNA5SP340-201ENST00000517132 107 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.62□□□□□ -1.51
FREM3P0C091 AC090115.2-201ENST00000548060 883 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
FREM3P0C091 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.62□□□□□ -1.51
FREM3P0C091 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.62□□□□□ -1.51
FREM3P0C091 AL138895.2-201ENST00000603019 178 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.62□□□□□ -1.51
FREM3P0C091 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
FREM3P0C091 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
FREM3P0C091 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
FREM3P0C091 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.62□□□□□ -1.51
FREM3P0C091 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.62□□□□□ -1.51
FREM3P0C091 MIR433-201ENST00000384837 93 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 AL389925.1-201ENST00000432257 728 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 EMC3-AS1-205ENST00000438698 534 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.62□□□□□ -1.51
FREM3P0C091 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.62□□□□□ -1.51
FREM3P0C091 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.62□□□□□ -1.51
FREM3P0C091 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.62□□□□□ -1.51
FREM3P0C091 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.62□□□□□ -1.51
FREM3P0C091 AC006499.4-201ENST00000510947 694 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 RNA5SP434-201ENST00000516647 121 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AC092332.1-201ENST00000563684 829 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.62□□□□□ -1.51
FREM3P0C091 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 FO681491.1-202ENST00000623392 737 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AC093225.1-201ENST00000506867 1408 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 AC007114.2-201ENST00000576014 4281 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
FREM3P0C091 AC034229.2-201ENST00000566945 2508 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 AP003486.1-201ENST00000525716 3994 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
FREM3P0C091 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.61□□□□□ -1.51
FREM3P0C091 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.61□□□□□ -1.51
FREM3P0C091 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
FREM3P0C091 AL354890.1-201ENST00000413730 346 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 AC007568.1-201ENST00000422912 471 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 RPL12P11-201ENST00000439970 501 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 SOCS5P1-201ENST00000440415 949 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 AC097463.1-201ENST00000447288 481 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 RN7SL193P-201ENST00000491708 276 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.61□□□□□ -1.51
FREM3P0C091 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.61□□□□□ -1.51
FREM3P0C091 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.61□□□□□ -1.51
FREM3P0C091 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.61□□□□□ -1.51
FREM3P0C091 AC008507.3-201ENST00000585753 472 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.61□□□□□ -1.51
FREM3P0C091 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.61□□□□□ -1.51
FREM3P0C091 AC073488.6-201ENST00000632293 754 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 MTCO1P28-201ENST00000574177 1528 ntBASIC5.61□□□□□ -1.51
FREM3P0C091 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
FREM3P0C091 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
FREM3P0C091 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FREM3P0C091 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
FREM3P0C091 MIR323B-201ENST00000385269 82 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AL157702.1-201ENST00000398764 426 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.6□□□□□ -1.51
FREM3P0C091 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.6□□□□□ -1.51
FREM3P0C091 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 SDC4P-201ENST00000453285 601 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.6□□□□□ -1.51
FREM3P0C091 RN7SKP238-201ENST00000516483 249 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 NATP-201ENST00000523491 878 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AP004609.2-201ENST00000532177 190 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms