Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 AP003119.3-201ENST00000566747 4192 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 RNU6-543P-201ENST00000362576 108 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 RPS3AP24-201ENST00000407896 734 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 RN7SKP236-201ENST00000410635 284 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 RPS27AP7-201ENST00000422792 455 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.38□□□□□ -1.23
PDGFAP04085 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 AC008072.1-201ENST00000434254 824 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AL596276.1-201ENST00000434465 418 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.38□□□□□ -1.23
PDGFAP04085 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 MTCO3P11-201ENST00000455103 774 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 RPL5P24-201ENST00000463742 885 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 RN7SL74P-201ENST00000464966 299 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.38□□□□□ -1.23
PDGFAP04085 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC079080.1-201ENST00000479841 822 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 CEACAMP3-202ENST00000483806 638 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC117395.1-201ENST00000487390 403 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 RPL12P7-201ENST00000493832 494 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC7.38□□□□□ -1.23
PDGFAP04085 AP001207.1-201ENST00000524051 481 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 HNRNPCP8-201ENST00000528764 888 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC7.38□□□□□ -1.23
PDGFAP04085 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC025260.1-201ENST00000548858 430 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC023080.1-201ENST00000551663 931 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC7.38□□□□□ -1.23
PDGFAP04085 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 ELOCP28-201ENST00000590044 317 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AL161729.2-201ENST00000605700 456 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC068276.1-201ENST00000605793 379 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC023206.1-201ENST00000605824 298 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC069499.2-201ENST00000610665 382 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 SEPT14P19-203ENST00000633205 211 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC099654.12-201ENST00000639868 649 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 AC114324.1-201ENST00000504077 3152 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
PDGFAP04085 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.37□□□□□ -1.23
PDGFAP04085 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC009948.5-201ENST00000624360 4406 ntBASIC7.37□□□□□ -1.23
PDGFAP04085 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PDGFAP04085 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.37□□□□□ -1.23
PDGFAP04085 AC013444.1-201ENST00000428909 1904 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms