Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.59□□□□□ -1.35
APOEP02649 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.59□□□□□ -1.35
APOEP02649 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.59□□□□□ -1.35
APOEP02649 AL590399.4-201ENST00000436561 601 ntBASIC6.59□□□□□ -1.35
APOEP02649 AC009237.1-201ENST00000442127 744 ntBASIC6.59□□□□□ -1.35
APOEP02649 TIMM8BP2-201ENST00000445940 251 ntBASIC6.59□□□□□ -1.35
APOEP02649 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.59□□□□□ -1.35
APOEP02649 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.59□□□□□ -1.35
APOEP02649 RN7SL165P-201ENST00000477476 291 ntBASIC6.59□□□□□ -1.35
APOEP02649 AC010343.2-201ENST00000510162 224 ntBASIC6.59□□□□□ -1.35
APOEP02649 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.59□□□□□ -1.35
APOEP02649 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.59□□□□□ -1.35
APOEP02649 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.59□□□□□ -1.35
APOEP02649 AC023310.2-201ENST00000553844 547 ntBASIC6.59□□□□□ -1.35
APOEP02649 AC009120.3-201ENST00000563335 499 ntBASIC6.59□□□□□ -1.35
APOEP02649 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.59□□□□□ -1.35
APOEP02649 AL008723.3-201ENST00000608926 449 ntBASIC6.59□□□□□ -1.35
APOEP02649 MIR6780B-201ENST00000610307 79 ntBASIC6.59□□□□□ -1.35
APOEP02649 MIR7159-201ENST00000620587 66 ntBASIC6.59□□□□□ -1.35
APOEP02649 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.59□□□□□ -1.35
APOEP02649 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
APOEP02649 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
APOEP02649 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.36
APOEP02649 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
APOEP02649 TMCC1P1-201ENST00000518897 1980 ntBASIC6.58□□□□□ -1.36
APOEP02649 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.58□□□□□ -1.36
APOEP02649 PPBPP2-201ENST00000513150 1362 ntBASIC6.58□□□□□ -1.36
APOEP02649 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.58□□□□□ -1.36
APOEP02649 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.58□□□□□ -1.36
APOEP02649 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.58□□□□□ -1.36
APOEP02649 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.58□□□□□ -1.36
APOEP02649 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
APOEP02649 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 RNA5SP232-201ENST00000364144 119 ntBASIC6.58□□□□□ -1.36
APOEP02649 MIR188-201ENST00000385034 86 ntBASIC6.58□□□□□ -1.36
APOEP02649 RN7SKP86-201ENST00000410454 332 ntBASIC6.58□□□□□ -1.36
APOEP02649 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.58□□□□□ -1.36
APOEP02649 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 AC112492.2-201ENST00000432774 1030 ntBASIC6.58□□□□□ -1.36
APOEP02649 SOCS5P1-201ENST00000440415 949 ntBASIC6.58□□□□□ -1.36
APOEP02649 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 AL645936.1-201ENST00000441979 518 ntBASIC6.58□□□□□ -1.36
APOEP02649 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
APOEP02649 OR9A1P-202ENST00000484361 945 ntBASIC6.58□□□□□ -1.36
APOEP02649 RN7SL362P-201ENST00000494228 267 ntBASIC6.58□□□□□ -1.36
APOEP02649 RN7SL649P-201ENST00000496974 275 ntBASIC6.58□□□□□ -1.36
APOEP02649 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.58□□□□□ -1.36
APOEP02649 NPIPB14P-203ENST00000532298 987 ntBASIC6.58□□□□□ -1.36
APOEP02649 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.58□□□□□ -1.36
APOEP02649 AC090115.2-201ENST00000548060 883 ntBASIC6.58□□□□□ -1.36
APOEP02649 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 MIR3154-201ENST00000577829 84 ntBASIC6.58□□□□□ -1.36
APOEP02649 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 RN7SL475P-201ENST00000583379 298 ntBASIC6.58□□□□□ -1.36
APOEP02649 AC005332.4-201ENST00000592752 579 ntBASIC6.58□□□□□ -1.36
APOEP02649 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.58□□□□□ -1.36
APOEP02649 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.58□□□□□ -1.36
APOEP02649 AC009779.8-202ENST00000607990 932 ntBASIC6.58□□□□□ -1.36
APOEP02649 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
APOEP02649 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.58□□□□□ -1.36
APOEP02649 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.58□□□□□ -1.36
APOEP02649 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
APOEP02649 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.58□□□□□ -1.36
APOEP02649 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
APOEP02649 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.58□□□□□ -1.36
APOEP02649 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.57□□□□□ -1.36
APOEP02649 AL031123.3-201ENST00000623345 1837 ntBASIC6.57□□□□□ -1.36
APOEP02649 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
APOEP02649 LINC01616-201ENST00000561816 2280 ntBASIC6.57□□□□□ -1.36
APOEP02649 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
APOEP02649 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 AC011815.2-201ENST00000618230 2021 ntBASIC6.57□□□□□ -1.36
APOEP02649 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
APOEP02649 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.57□□□□□ -1.36
APOEP02649 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
APOEP02649 RN7SKP171-201ENST00000364417 303 ntBASIC6.57□□□□□ -1.36
APOEP02649 UBE2V1P14-201ENST00000415815 558 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms