Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 TPRX1P1-201ENST00000557620 319 ntBASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC026956.1-201ENST00000558741 396 ntBASIC5.31□□□□□ -1.56
HLA-DQB1P01920 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC126323.4-201ENST00000566935 234 ntBASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 RN7SL426P-201ENST00000579106 295 ntBASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 AP005435.3-201ENST00000531260 3198 ntBASIC5.31□□□□□ -1.56
HLA-DQB1P01920 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB1P01920 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC092376.2-201ENST00000622621 4116 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC002525.1-201ENST00000624392 1622 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 RN7SKP145-201ENST00000363291 303 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 RNA5SP355-201ENST00000365317 135 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 RN7SKP39-201ENST00000410773 322 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AHCYP8-201ENST00000425108 209 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC009303.1-201ENST00000426307 352 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 OR52S1P-201ENST00000427016 937 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC016908.1-201ENST00000442571 1219 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 RPSAP51-201ENST00000497462 645 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 ENPP7P3-201ENST00000509123 241 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC010503.3-201ENST00000594355 540 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC083964.1-201ENST00000607549 630 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC007786.3-201ENST00000615154 596 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC127071.2-201ENST00000623293 527 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AC063952.1-203ENST00000634410 658 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AP001029.2-203ENST00000589795 4910 ntBASIC5.3□□□□□ -1.56
HLA-DQB1P01920 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB1P01920 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 AC126474.2-201ENST00000623268 1750 ntBASIC5.29□□□□□ -1.56
HLA-DQB1P01920 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 MAPK10-338ENST00000641647 3362 ntBASIC5.29□□□□□ -1.56
HLA-DQB1P01920 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HLA-DQB1P01920 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms