Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TIMP1P01033 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 MAPK10-261ENST00000641050 3109 ntBASIC6.72□□□□□ -1.33
TIMP1P01033 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.72□□□□□ -1.33
TIMP1P01033 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.72□□□□□ -1.33
TIMP1P01033 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TIMP1P01033 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TIMP1P01033 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.72□□□□□ -1.33
TIMP1P01033 SPTLC1P2-201ENST00000407089 121 ntBASIC6.72□□□□□ -1.33
TIMP1P01033 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.72□□□□□ -1.33
TIMP1P01033 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.72□□□□□ -1.33
TIMP1P01033 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 AC074087.1-201ENST00000512059 724 ntBASIC6.72□□□□□ -1.33
TIMP1P01033 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.72□□□□□ -1.33
TIMP1P01033 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.72□□□□□ -1.33
TIMP1P01033 IGLV3-6-201ENST00000523937 250 ntBASIC6.72□□□□□ -1.33
TIMP1P01033 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.72□□□□□ -1.33
TIMP1P01033 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 MIR4505-201ENST00000582238 73 ntBASIC6.72□□□□□ -1.33
TIMP1P01033 AL049840.6-201ENST00000604583 345 ntBASIC6.72□□□□□ -1.33
TIMP1P01033 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.72□□□□□ -1.33
TIMP1P01033 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.72□□□□□ -1.33
TIMP1P01033 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 GNL2P1-201ENST00000451274 2190 ntBASIC6.72□□□□□ -1.33
TIMP1P01033 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.72□□□□□ -1.33
TIMP1P01033 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TIMP1P01033 CUBNP3-201ENST00000457461 1784 ntBASIC6.72□□□□□ -1.33
TIMP1P01033 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TIMP1P01033 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
TIMP1P01033 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
TIMP1P01033 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.71□□□□□ -1.33
TIMP1P01033 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
TIMP1P01033 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
TIMP1P01033 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
TIMP1P01033 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.33
TIMP1P01033 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TIMP1P01033 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.71□□□□□ -1.34
TIMP1P01033 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.71□□□□□ -1.34
TIMP1P01033 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TIMP1P01033 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.71□□□□□ -1.34
TIMP1P01033 AL096829.1-201ENST00000413677 457 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 RPL35AP3-201ENST00000414680 288 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.71□□□□□ -1.34
TIMP1P01033 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.71□□□□□ -1.34
TIMP1P01033 DEFA9P-201ENST00000433042 285 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.71□□□□□ -1.34
TIMP1P01033 GAPDHP58-201ENST00000438477 1006 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.71□□□□□ -1.34
TIMP1P01033 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.71□□□□□ -1.34
TIMP1P01033 GAPDHP23-201ENST00000444823 993 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC073909.1-201ENST00000447112 999 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.71□□□□□ -1.34
TIMP1P01033 RN7SL269P-201ENST00000467795 305 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC095057.1-201ENST00000507583 168 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 DUTP7-201ENST00000507982 486 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.71□□□□□ -1.34
TIMP1P01033 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 SNORA26.10-201ENST00000516427 141 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.71□□□□□ -1.34
TIMP1P01033 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.71□□□□□ -1.34
TIMP1P01033 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
TIMP1P01033 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.71□□□□□ -1.34
TIMP1P01033 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.71□□□□□ -1.34
TIMP1P01033 AC079395.2-201ENST00000610982 737 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC118658.2-201ENST00000618697 459 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.71□□□□□ -1.34
TIMP1P01033 AL357562.1-201ENST00000624911 609 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 AC116631.1-202ENST00000640984 683 ntBASIC6.71□□□□□ -1.34
TIMP1P01033 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.71□□□□□ -1.34
TIMP1P01033 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.71□□□□□ -1.34
TIMP1P01033 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
TIMP1P01033 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TIMP1P01033 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.71□□□□□ -1.34
TIMP1P01033 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TIMP1P01033 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TIMP1P01033 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.71□□□□□ -1.34
TIMP1P01033 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TIMP1P01033 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
TIMP1P01033 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms