Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MTCO3P22-201ENST00000603219 784 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC015819.1-201ENST00000613588 663 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AL158062.1-201ENST00000619632 745 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AC073862.4-201ENST00000622982 854 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 AP000577.1-201ENST00000624366 878 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 UGT2B27P-201ENST00000505092 1620 ntBASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
COL4A3BPQ9Y5P4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
COL4A3BPQ9Y5P4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.46□□□□□ -1.21
COL4A3BPQ9Y5P4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
COL4A3BPQ9Y5P4 AL359195.2-201ENST00000623657 4412 ntBASIC7.46□□□□□ -1.21
COL4A3BPQ9Y5P4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.46□□□□□ -1.21
COL4A3BPQ9Y5P4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
COL4A3BPQ9Y5P4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
COL4A3BPQ9Y5P4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC105749.1-201ENST00000631338 2008 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 PTP4A1P1-201ENST00000420539 515 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 VN1R53P-201ENST00000429536 957 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 YRDCP3-201ENST00000456507 480 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 RPL7AP23-201ENST00000482625 776 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 RN7SL561P-201ENST00000488553 281 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC063943.2-201ENST00000495697 534 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 OR9G2P-201ENST00000533326 880 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC122134.1-202ENST00000569111 1201 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 RPL29P33-201ENST00000587474 316 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AP002345.2-201ENST00000609961 904 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AL450226.2-201ENST00000622913 439 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AL132796.3-201ENST00000624703 900 ntBASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
COL4A3BPQ9Y5P4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC007012.2-201ENST00000623206 1676 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 RNU6-650P-201ENST00000365658 111 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 MIR191-201ENST00000384873 92 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 MARK2P12-201ENST00000420129 585 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC015524.1-201ENST00000491585 472 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC093763.2-201ENST00000505334 1223 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms