Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 MRPL57P1-201ENST00000621486 265 ntBASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 AL357140.4-201ENST00000636827 412 ntBASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 AL359694.2-201ENST00000567753 1615 ntBASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA1Q9UND3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 RNA5SP350-201ENST00000363298 111 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 RNA5SP122-201ENST00000384457 108 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 RPL21P50-201ENST00000417698 477 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AL389925.1-201ENST00000432257 728 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC003989.1-201ENST00000434569 565 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AMYP1-201ENST00000440059 1023 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 EIF5AP4-201ENST00000441206 465 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC016724.1-201ENST00000453215 421 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 NDUFA5P5-201ENST00000468361 342 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC022415.1-202ENST00000486612 523 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AP002453.1-201ENST00000492327 668 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC022206.1-201ENST00000495947 347 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC091965.3-201ENST00000506236 208 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 SNX18P25-201ENST00000510539 758 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC027667.1-201ENST00000545814 304 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC002519.2-203ENST00000567043 837 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC005726.4-201ENST00000582858 458 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC124916.2-201ENST00000604416 224 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC091167.5-201ENST00000605689 894 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC015982.1-201ENST00000608113 465 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AP001962.1-201ENST00000624114 559 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AL596275.2-208ENST00000641192 594 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC010624.4-201ENST00000597606 1351 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AL391261.1-201ENST00000555712 1479 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 AC093829.1-201ENST00000506662 1618 ntBASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.87□□□□□ -1.47
NPIPA1Q9UND3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NPIPA1Q9UND3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms