Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.87□□□□□ -1.15
CNTN3Q9P232 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 RNU6-1005P-201ENST00000384519 107 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 MIR27A-201ENST00000385073 78 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 VDAC1P2-201ENST00000423609 850 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 PNRC2P1-201ENST00000423940 420 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC104698.1-201ENST00000435671 276 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 RN7SKP198-201ENST00000459286 306 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC117395.2-201ENST00000463122 1128 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC135999.1-201ENST00000478962 479 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 RN7SL306P-201ENST00000492941 296 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 TECRP2-201ENST00000503270 928 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC119751.1-201ENST00000513357 765 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 RPL10P18-201ENST00000519384 309 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AP005597.2-201ENST00000526238 341 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AP002004.1-206ENST00000532441 876 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 SLC25A51P2-201ENST00000535708 889 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC087465.1-201ENST00000560574 245 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 RPSAP66-201ENST00000592196 606 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AL136985.2-201ENST00000607372 535 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC068944.2-201ENST00000610373 403 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AL121782.1-201ENST00000611242 413 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AP003400.5-201ENST00000624827 617 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 TRIM51HP-202ENST00000530412 1823 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AL133320.1-201ENST00000621423 2352 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AL359396.1-201ENST00000623151 2376 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC011503.2-201ENST00000594230 1500 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 AL359922.2-201ENST00000581788 3017 ntBASIC7.86□□□□□ -1.15
CNTN3Q9P232 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTN3Q9P232 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CNTN3Q9P232 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CNTN3Q9P232 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNTN3Q9P232 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNTN3Q9P232 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
CNTN3Q9P232 MFSD8-256ENST00000641949 1640 ntBASIC7.85□□□□□ -1.15
CNTN3Q9P232 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CNTN3Q9P232 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
CNTN3Q9P232 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNTN3Q9P232 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNTN3Q9P232 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNTN3Q9P232 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNTN3Q9P232 EPS15P1-202ENST00000459691 2071 ntBASIC7.85□□□□□ -1.15
CNTN3Q9P232 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CNTN3Q9P232 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms